RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 GPR108Q9NPR9 543 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 C11orf16Q9NQ32 467 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 SMC4Q9NTJ3 1288 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZHX1Q9UKY1 873 aaPredicted RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ADAMTS5Q9UNA0 930 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 TMX2Q9Y320 296 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 CACNA1FO60840 1977 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 CACNA1BQ00975 2339 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 SYNRGQ9UMZ2 1314 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZFHX2Q9C0A1 2572 aaPredicted RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 LOC285556D6RIA3 1793 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 PLXNB2O15031 1838 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 PHIPQ8WWQ0 1821 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 SMCHD1A6NHR9 2005 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 EP300Q09472 2414 aaPredicted RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 DNAJC25-GNG10A0A024R161 153 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 MYADML2A6NDP7 307 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 E9PSI1 815 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 VWA5AO00534 786 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZEB2O60315 1214 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 CD4P01730 458 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 CA3P07451 260 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 SUPT20HL2P0C7V6 817 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 ACTN1P12814 892 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 SSTR3P32745 418 aaPredicted RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZAP70P43403 619 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 PLCD1P51178 756 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 NKX3-2P78367 333 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 FOXK2Q01167 660 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 NHLH1Q02575 133 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 ICA1Q05084 483 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 GABPAQ06546 454 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 GRB10Q13322 594 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 OS9Q13438 667 aaPredicted RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 ITGA7Q13683 1181 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 TTLL4Q14679 1199 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 CCDC144BQ3MJ40 725 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 TNNI3KQ59H18 835 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 KIAA1755Q5JYT7 1200 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 CXCL17Q6UXB2 119 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 MAMDC4Q6UXC1 1216 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 NOL8Q76FK4 1167 aaKnown RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZNF467Q7Z7K2 595 aaPredicted RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 FAM178BQ8IXR5 827 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 MAGEB6Q8N7X4 407 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 SLC43A3Q8NBI5 491 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 ARNTL2Q8WYA1 636 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 KHSRPQ92945 711 aaKnown RBP eCLIP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 CCDC17Q96LX7 622 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 FBXL18Q96ME1 805 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 SLC9A7Q96T83 725 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 MEIS3Q99687 375 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 DBNDD2Q9BQY9 259 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 NOC4LQ9BVI4 516 aaKnown RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 TEX13BQ9BXU2 312 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 CRNKL1Q9BZJ0 848 aaKnown RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 AP5M1Q9H0R1 490 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 UPF3AQ9H1J1 476 aaKnown RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 WNT8AQ9H1J5 351 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 VCPKMTQ9H867 229 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 CERS4Q9HA82 394 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 GOPCQ9HD26 462 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 CD320Q9NPF0 282 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 PIH1D3Q9NQM4 214 aaKnown RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 MCM9Q9NXL9 1143 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 LMCD1Q9NZU5 365 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 SWAP70Q9UH65 585 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZNF214Q9UL59 606 aaPredicted RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 PPP1R9AQ9ULJ8 1098 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 NOB1Q9ULX3 412 aaKnown RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 FPGT-TNNI3KV9GXZ4 949 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 RLFQ13129 1914 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 MYH2Q9UKX2 1941 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 UMODL1Q5DID0 1318 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 SPTBN4Q9H254 2564 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 TCF20Q9UGU0 1960 aaKnown RBP2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 MAST2Q6P0Q8 1798 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 MYO7AQ13402 2215 aa2.87□□□□□ -1.95
RNU4-53P-201ENST00000410828 LTBP2Q14767 1821 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 DOCK2Q92608 1830 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 CHD8Q9HCK8 2581 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 GVINP1Q7Z2Y8 2422 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 MAGEB6P1A0A0J9YX57 407 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 EPOPA6NHQ4 379 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 CTAGE5O15320 804 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 DYNC1LI2O43237 492 aaPredicted RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 DCXO43602 365 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 RAD21O60216 631 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 ST18O60284 1047 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 B4GALT4O60513 344 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 SURF6O75683 361 aaKnown RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 GNAI2P04899 355 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 CT47B1P0C2W7 299 aaPredicted RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 AKR1B1P15121 316 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 KCNA5P22460 613 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 RFC2P35250 354 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 SLC4A3P48751 1232 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 IRX5P78411 483 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms