RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ATP2A1O14983 1001 aa24.43■■□□□ 1.5
PDGFA-204ENST00000405692 OAZ1P54368 228 aa24.43■■□□□ 1.5
PDGFA-204ENST00000405692 SART3Q15020 963 aaKnown RBP24.43■■□□□ 1.5
PDGFA-204ENST00000405692 MORN1Q5T089 497 aa24.43■■□□□ 1.5
PDGFA-204ENST00000405692 KCTD1Q719H9 257 aa24.43■■□□□ 1.5
PDGFA-204ENST00000405692 TEX13BQ9BXU2 312 aa24.43■■□□□ 1.5
PDGFA-204ENST00000405692 MAP2K5Q13163 448 aa24.42■■□□□ 1.5
PDGFA-204ENST00000405692 NECTIN1Q15223 517 aa24.42■■□□□ 1.5
PDGFA-204ENST00000405692 IFIT1BQ5T764 474 aaKnown RBP24.42■■□□□ 1.5
PDGFA-204ENST00000405692 ENAHQ8N8S7 591 aaPredicted RBP24.42■■□□□ 1.5
PDGFA-204ENST00000405692 PNMA1Q8ND90 353 aa24.42■■□□□ 1.5
PDGFA-204ENST00000405692 REPS2Q8NFH8 660 aa24.42■■□□□ 1.5
PDGFA-204ENST00000405692 NKX2-3Q8TAU0 364 aa24.42■■□□□ 1.5
PDGFA-204ENST00000405692 SLC38A10Q9HBR0 1119 aa24.42■■□□□ 1.5
PDGFA-204ENST00000405692 ZNF214Q9UL59 606 aaPredicted RBP24.42■■□□□ 1.5
PDGFA-204ENST00000405692 PARP14Q460N5 1801 aa24.42■■□□□ 1.5
PDGFA-204ENST00000405692 SLC27A2O14975 620 aa24.41■■□□□ 1.5
PDGFA-204ENST00000405692 PDHBP11177 359 aa24.41■■□□□ 1.5
PDGFA-204ENST00000405692 CYP2B6P20813 491 aa24.41■■□□□ 1.5
PDGFA-204ENST00000405692 GPATCH4Q5T3I0 446 aaKnown RBP24.41■■□□□ 1.5
PDGFA-204ENST00000405692 CREB3L3Q68CJ9 461 aa24.41■■□□□ 1.5
PDGFA-204ENST00000405692 ABRAQ8N0Z2 381 aa24.41■■□□□ 1.5
PDGFA-204ENST00000405692 USP6NLQ92738 828 aa24.41■■□□□ 1.5
PDGFA-204ENST00000405692 CHMP4CQ96CF2 233 aa24.41■■□□□ 1.5
PDGFA-204ENST00000405692 APBA2Q99767 749 aa24.41■■□□□ 1.5
PDGFA-204ENST00000405692 SLC5A4Q9NY91 659 aa24.41■■□□□ 1.5
PDGFA-204ENST00000405692 GRB14Q14449 540 aa24.4■■□□□ 1.5
PDGFA-204ENST00000405692 SNRNP48Q6IEG0 339 aaKnown RBP24.4■■□□□ 1.5
PDGFA-204ENST00000405692 REC8O95072 547 aa24.39■■□□□ 1.49
PDGFA-204ENST00000405692 HMGCRP04035 888 aa24.39■■□□□ 1.49
PDGFA-204ENST00000405692 SNHG28P0DPA3 235 aa24.39■■□□□ 1.49
PDGFA-204ENST00000405692 FCER1AP12319 257 aa24.39■■□□□ 1.49
PDGFA-204ENST00000405692 ELNP15502 786 aa24.39■■□□□ 1.49
PDGFA-204ENST00000405692 BTNL9Q6UXG8 535 aa24.39■■□□□ 1.49
PDGFA-204ENST00000405692 CYB5R4Q7L1T6 521 aa24.39■■□□□ 1.49
PDGFA-204ENST00000405692 DPP9Q86TI2 863 aa24.39■■□□□ 1.49
PDGFA-204ENST00000405692 CPXCR1Q8N123 301 aa24.39■■□□□ 1.49
PDGFA-204ENST00000405692 MTA3Q9BTC8 594 aa24.39■■□□□ 1.49
PDGFA-204ENST00000405692 IFIT3O14879 490 aaKnown RBP24.38■■□□□ 1.49
PDGFA-204ENST00000405692 ZKSCAN1P17029 563 aaPredicted RBP24.38■■□□□ 1.49
PDGFA-204ENST00000405692 SOX10P56693 466 aa24.38■■□□□ 1.49
PDGFA-204ENST00000405692 ZNF543Q08ER8 600 aa24.38■■□□□ 1.49
PDGFA-204ENST00000405692 STOX1Q6ZVD7 989 aa24.38■■□□□ 1.49
PDGFA-204ENST00000405692 GPCPD1Q9NPB8 672 aa24.38■■□□□ 1.49
PDGFA-204ENST00000405692 FBXO40Q9UH90 709 aa24.38■■□□□ 1.49
PDGFA-204ENST00000405692 PRR12Q9ULL5 1215 aa24.38■■□□□ 1.49
PDGFA-204ENST00000405692 INHAP05111 366 aa24.37■■□□□ 1.49
PDGFA-204ENST00000405692 HOXC6P09630 235 aa24.37■■□□□ 1.49
PDGFA-204ENST00000405692 ADORA2AP29274 412 aa24.37■■□□□ 1.49
PDGFA-204ENST00000405692 KCTD2Q14681 263 aa24.37■■□□□ 1.49
PDGFA-204ENST00000405692 SEC23AQ15436 765 aa24.37■■□□□ 1.49
PDGFA-204ENST00000405692 SYDE2Q5VT97 1194 aa24.37■■□□□ 1.49
PDGFA-204ENST00000405692 MMP19Q99542 508 aa24.37■■□□□ 1.49
PDGFA-204ENST00000405692 RAVER2Q9HCJ3 691 aaKnown RBP24.37■■□□□ 1.49
PDGFA-204ENST00000405692 PNMA2Q9UL42 364 aa24.37■■□□□ 1.49
PDGFA-204ENST00000405692 TAF6LQ9Y6J9 622 aa24.37■■□□□ 1.49
PDGFA-204ENST00000405692 FRMPD2Q68DX3 1309 aaPredicted RBP24.36■■□□□ 1.49
PDGFA-204ENST00000405692 MCM5P33992 734 aa24.36■■□□□ 1.49
PDGFA-204ENST00000405692 WTAPQ15007 396 aa24.36■■□□□ 1.49
PDGFA-204ENST00000405692 ASPRV1Q53RT3 343 aa24.36■■□□□ 1.49
PDGFA-204ENST00000405692 MB21D2Q8IYB1 491 aaPredicted RBP24.36■■□□□ 1.49
PDGFA-204ENST00000405692 CHST13Q8NET6 341 aa24.36■■□□□ 1.49
PDGFA-204ENST00000405692 DOCK3Q8IZD9 2030 aa24.35■■□□□ 1.49
PDGFA-204ENST00000405692 MYCP01106 439 aaPredicted RBP24.35■■□□□ 1.49
PDGFA-204ENST00000405692 SLC4A3P48751 1232 aa24.35■■□□□ 1.49
PDGFA-204ENST00000405692 KRT32Q14532 448 aa24.35■■□□□ 1.49
PDGFA-204ENST00000405692 TKFCQ3LXA3 575 aa24.35■■□□□ 1.49
PDGFA-204ENST00000405692 TMEM67Q5HYA8 995 aa24.35■■□□□ 1.49
PDGFA-204ENST00000405692 TTBK2Q6IQ55 1244 aa24.35■■□□□ 1.49
PDGFA-204ENST00000405692 RASGRP2Q7LDG7 609 aa24.35■■□□□ 1.49
PDGFA-204ENST00000405692 COL11A1P12107 1806 aaPredicted RBP24.34■■□□□ 1.49
PDGFA-204ENST00000405692 EPB41L2O43491 1005 aaKnown RBP24.34■■□□□ 1.49
PDGFA-204ENST00000405692 PARP1P09874 1014 aaKnown RBP24.34■■□□□ 1.49
PDGFA-204ENST00000405692 CCL5P13501 91 aa24.34■■□□□ 1.49
PDGFA-204ENST00000405692 SLC16A2P36021 539 aa24.34■■□□□ 1.49
PDGFA-204ENST00000405692 MFSD14CQ5VZR4 134 aa24.34■■□□□ 1.49
PDGFA-204ENST00000405692 TMTC2Q8N394 836 aa24.34■■□□□ 1.49
PDGFA-204ENST00000405692 TRIB2Q92519 343 aa24.34■■□□□ 1.49
PDGFA-204ENST00000405692 TMEM87BQ96K49 555 aa24.34■■□□□ 1.49
PDGFA-204ENST00000405692 RNF208Q9H0X6 261 aa24.34■■□□□ 1.49
PDGFA-204ENST00000405692 PLXNB2O15031 1838 aa24.33■■□□□ 1.49
PDGFA-204ENST00000405692 CAPN2P17655 700 aa24.33■■□□□ 1.49
PDGFA-204ENST00000405692 RGS19P49795 217 aa24.33■■□□□ 1.49
PDGFA-204ENST00000405692 MTFR1Q15390 333 aa24.33■■□□□ 1.49
PDGFA-204ENST00000405692 TSGA10IPQ3SY00 556 aa24.33■■□□□ 1.49
PDGFA-204ENST00000405692 RANBP17Q9H2T7 1088 aaKnown RBP24.33■■□□□ 1.49
PDGFA-204ENST00000405692 ZNF236Q9UL36 1845 aa24.33■■□□□ 1.48
PDGFA-204ENST00000405692 PRC1O43663 620 aa24.32■■□□□ 1.48
PDGFA-204ENST00000405692 CCDC174Q6PII3 467 aa24.32■■□□□ 1.48
PDGFA-204ENST00000405692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.32■■□□□ 1.48
PDGFA-204ENST00000405692 CHST3Q7LGC8 479 aa24.32■■□□□ 1.48
PDGFA-204ENST00000405692 DDX11Q96FC9 970 aa24.32■■□□□ 1.48
PDGFA-204ENST00000405692 HMX1Q9NP08 348 aaPredicted RBP24.32■■□□□ 1.48
PDGFA-204ENST00000405692 RIPK3Q9Y572 518 aa24.32■■□□□ 1.48
PDGFA-204ENST00000405692 RPTORQ8N122 1335 aa24.32■■□□□ 1.48
PDGFA-204ENST00000405692 EIF5BO60841 1220 aaKnown RBP24.31■■□□□ 1.48
PDGFA-204ENST00000405692 ICAM1P05362 532 aa24.31■■□□□ 1.48
PDGFA-204ENST00000405692 GJB1P08034 283 aa24.31■■□□□ 1.48
PDGFA-204ENST00000405692 ANTXR2P58335 489 aa24.31■■□□□ 1.48
PDGFA-204ENST00000405692 OLFML2BQ68BL8 750 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms