RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 CDC25AP30304 524 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 COPB1P53618 953 aaKnown RBP17.69■□□□□ 0.42
TOM1-203ENST00000404284 ERVK-24P63145 666 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 STAG2Q8N3U4 1231 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 RASGRP4Q8TDF6 673 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 KAT14Q9H8E8 782 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 SH3GLB2Q9NR46 395 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 PCDHA4Q9UN74 947 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 GDAQ9Y2T3 454 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 RNF225M0QZC1 329 aaPredicted RBP17.69■□□□□ 0.42
TOM1-203ENST00000404284 TBC1D8O95759 1140 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 SPAG1Q07617 926 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 TCP11X2Q5H9J9 407 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 TMED8Q6PL24 325 aaPredicted RBP17.69■□□□□ 0.42
TOM1-203ENST00000404284 CREBRFQ8IUR6 639 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 NLRP3Q96P20 1036 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 VPS16Q9H269 839 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 TAB2Q9NYJ8 693 aa17.69■□□□□ 0.42
TOM1-203ENST00000404284 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.69■□□□□ 0.42
TOM1-203ENST00000404284 SASH3O75995 380 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 TFAP4Q01664 338 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 SLC35G1Q2M3R5 365 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 C12orf60Q5U649 245 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 DGKHQ86XP1 1220 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 PNMA1Q8ND90 353 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 NEK11Q8NG66 645 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 GOLGA1Q92805 767 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 NYXQ9GZU5 481 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 ABHD10Q9NUJ1 306 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 KCNJ18B7U540 433 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 ATP8B1O43520 1251 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 KIF5CO60282 957 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 PRCPP42785 496 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 KCNJ12Q14500 433 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 NAALADL2Q58DX5 795 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 ACRBPQ8NEB7 543 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 ANKS1AQ92625 1134 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 PARD6BQ9BYG5 372 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 RASSF4Q9H2L5 321 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 DISC1Q9NRI5 854 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 SRP68Q9UHB9 627 aaKnown RBP17.68■□□□□ 0.42
TOM1-203ENST00000404284 SBF2Q86WG5 1849 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 ROBO3Q96MS0 1386 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 GRM4Q14833 912 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 DZIP1Q86YF9 867 aaKnown RBP17.68■□□□□ 0.42
TOM1-203ENST00000404284 CCDC24Q8N4L8 307 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 UBXN6Q9BZV1 441 aa17.68■□□□□ 0.42
TOM1-203ENST00000404284 LOC102724159A0A0B4J2E5 919 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 STAT6P42226 847 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 PWP2Q15269 919 aaKnown RBP17.67■□□□□ 0.42
TOM1-203ENST00000404284 TMTC1Q8IUR5 882 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 DYNLL2Q96FJ2 89 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 YY1AP1Q9H869 796 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 NARFQ9UHQ1 456 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 MAD2L2Q9UI95 211 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 TTF2Q9UNY4 1162 aaKnown RBP17.67■□□□□ 0.42
TOM1-203ENST00000404284 TXLNAP40222 546 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
TOM1-203ENST00000404284 IRF2BP1Q8IU81 584 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 C10orf67Q8IYJ2 551 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 TMEM60Q9H2L4 133 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 GEMIN8Q9NWZ8 242 aaKnown RBP17.67■□□□□ 0.42
TOM1-203ENST00000404284 MAPK8IP1Q9UQF2 711 aa17.67■□□□□ 0.42
TOM1-203ENST00000404284 ABL1P00519 1130 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 TM4SF1P30408 202 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 NOP2P46087 812 aaKnown RBP17.66■□□□□ 0.42
TOM1-203ENST00000404284 TRIM14Q14142 442 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 ZNF569Q5MCW4 686 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 SRGAP1Q7Z6B7 1085 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 CDC23Q9UJX2 597 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 TNRC6CQ9HCJ0 1690 aaKnown RBP17.66■□□□□ 0.42
TOM1-203ENST00000404284 PP2D1A8MPX8 630 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 GYS2P54840 703 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 CHMP4BP1P59074 171 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 WWC2Q6AWC2 1192 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 ADSSL1Q8N142 457 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 DAGLBQ8NCG7 672 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 PCDHA6Q9UN73 950 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 PCDHA8Q9Y5H6 950 aa17.66■□□□□ 0.42
TOM1-203ENST00000404284 TRIM49BA6NDI0 452 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 TRIM66O15016 1216 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 CYTH3O43739 400 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 ARHGAP25P42331 645 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 GTF2A1P52655 376 aaPredicted RBP17.65■□□□□ 0.42
TOM1-203ENST00000404284 SPTY2D1Q68D10 685 aaPredicted RBP17.65■□□□□ 0.42
TOM1-203ENST00000404284 SLC51AQ86UW1 340 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 ANKRD20A12PQ8NF67 263 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 NUP88Q99567 741 aaPredicted RBP17.65■□□□□ 0.42
TOM1-203ENST00000404284 NAV1Q8NEY1 1877 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 CCDC194A0A1B0GVG4 234 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 USP17L3A6NCW0 530 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 USP17L4A6NCW7 530 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 NT5C2P49902 561 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 CYP26C1Q6V0L0 522 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 USP17L1Q7RTZ2 530 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 SLC35F6Q8N357 371 aa17.65■□□□□ 0.42
TOM1-203ENST00000404284 SH3RF3Q8TEJ3 882 aaPredicted RBP17.65■□□□□ 0.42
TOM1-203ENST00000404284 ZSWIM4Q9H7M6 989 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms