RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 NCAPH2Q6IBW4 605 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 REXO1L1PQ8IX06 675 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 CEP126Q9P2H0 1117 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 FAM83GA6ND36 823 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 TMEM232C9JQI7 657 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 JAK2O60674 1132 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 EEF1GP26641 437 aaKnown RBP10.98□□□□□ -0.65
PTPRM-203ENST00000400060 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.98□□□□□ -0.65
PTPRM-203ENST00000400060 TMEM67Q5HYA8 995 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 SEL1L2Q5TEA6 688 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 GRAMD4Q6IC98 578 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 CCDC80Q76M96 950 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 LINC00301Q8NCQ3 95 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 FAM81AQ8TBF8 368 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 CAND2O75155 1236 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 TPP2P29144 1249 aaPredicted RBP10.98□□□□□ -0.65
PTPRM-203ENST00000400060 COPB1P53618 953 aaKnown RBP10.98□□□□□ -0.65
PTPRM-203ENST00000400060 C2orf54Q08AI8 447 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 SEMA3FQ13275 785 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 ZFYVE27Q5T4F4 411 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 RASGRP2Q7LDG7 609 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 KLHDC4Q8TBB5 520 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 CYFIP2Q96F07 1278 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 PGBD1Q96JS3 809 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 GSDMAQ96QA5 445 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 DSCC1Q9BVC3 393 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 TEX13AQ9BXU3 409 aaPredicted RBP10.98□□□□□ -0.65
PTPRM-203ENST00000400060 MMRN2Q9H8L6 949 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 HNRNPCP07910 306 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTPRM-203ENST00000400060 SOGA3Q5TF21 947 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 SREK1Q8WXA9 508 aaKnown RBP10.97□□□□□ -0.65
PTPRM-203ENST00000400060 PLEKHF1Q96S99 279 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 SEPT11Q9NVA2 429 aaKnown RBP10.97□□□□□ -0.65
PTPRM-203ENST00000400060 SBNO1A3KN83 1393 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 ITIH6Q6UXX5 1313 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 TARBP1Q13395 1621 aaKnown RBP10.97□□□□□ -0.65
PTPRM-203ENST00000400060 IFIT3O14879 490 aaKnown RBP10.97□□□□□ -0.65
PTPRM-203ENST00000400060 IL9RQ01113 521 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 MORC3Q14149 939 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 FAM133BQ5BKY9 247 aaKnown RBP10.97□□□□□ -0.65
PTPRM-203ENST00000400060 ARHGEF18Q6ZSZ5 1173 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 FMR1NBQ8N0W7 255 aaPredicted RBP10.97□□□□□ -0.65
PTPRM-203ENST00000400060 AGGF1Q8N302 714 aaeCLIP10.97□□□□□ -0.653e-7■■■■□ 25
PTPRM-203ENST00000400060 SSH3Q8TE77 659 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 TBC1D5Q92609 795 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 TRAPPC9Q96Q05 1148 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 FAM192AQ9GZU8 254 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 UBA5Q9GZZ9 404 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 IKBKGQ9Y6K9 419 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 RTL9Q8NET4 1388 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 GNAT1P11488 350 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 KRT2P35908 639 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 SESTD1Q86VW0 696 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 CDC5LQ99459 802 aaKnown RBP10.97□□□□□ -0.65
PTPRM-203ENST00000400060 TAB2Q9NYJ8 693 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 PLAAQ9Y263 795 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 C15orf41Q9Y2V0 281 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 IQSEC2Q5JU85 1478 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 A0A1W2PP64 1363 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 POLR2DO15514 142 aaKnown RBP10.97□□□□□ -0.65
PTPRM-203ENST00000400060 DIAPH2O60879 1101 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 ACADSP16219 412 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 MAIP1Q8WWC4 291 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 SYNCQ9H7C4 482 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 EPB41L5Q9HCM4 733 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 FGFR1OP2Q9NVK5 253 aa10.97□□□□□ -0.65
PTPRM-203ENST00000400060 SASH3O75995 380 aa10.96□□□□□ -0.65
PTPRM-203ENST00000400060 AEBP2Q6ZN18 517 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-203ENST00000400060 SIRT2Q8IXJ6 389 aa10.96□□□□□ -0.65
PTPRM-203ENST00000400060 NELFBQ8WX92 580 aa10.96□□□□□ -0.65
PTPRM-203ENST00000400060 USP6NLQ92738 828 aa10.96□□□□□ -0.65
PTPRM-203ENST00000400060 IL17RAQ96F46 866 aa10.96□□□□□ -0.65
PTPRM-203ENST00000400060 SEC16BQ96JE7 1060 aa10.96□□□□□ -0.65
PTPRM-203ENST00000400060 TMEM87BQ96K49 555 aa10.96□□□□□ -0.65
PTPRM-203ENST00000400060 ECT2Q9H8V3 914 aa10.96□□□□□ -0.65
PTPRM-203ENST00000400060 EPB41P11171 864 aaKnown RBP10.96□□□□□ -0.65
PTPRM-203ENST00000400060 SPTY2D1Q68D10 685 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-203ENST00000400060 KLHL7Q8IXQ5 586 aa10.96□□□□□ -0.65
PTPRM-203ENST00000400060 MMGT1Q8N4V1 131 aa10.96□□□□□ -0.65
PTPRM-203ENST00000400060 CCT8L1PA6NM43 557 aa10.96□□□□□ -0.66
PTPRM-203ENST00000400060 ATP6V1G2O95670 118 aa10.96□□□□□ -0.66
PTPRM-203ENST00000400060 STRN3Q13033 797 aa10.96□□□□□ -0.66
PTPRM-203ENST00000400060 PPP2R5BQ15173 497 aa10.96□□□□□ -0.66
PTPRM-203ENST00000400060 ELOA2Q8IYF1 753 aaPredicted RBP10.96□□□□□ -0.66
PTPRM-203ENST00000400060 CNNM1Q9NRU3 951 aa10.96□□□□□ -0.66
PTPRM-203ENST00000400060 SPECC1L-ADORA2AF8WAN1 911 aa10.96□□□□□ -0.66
PTPRM-203ENST00000400060 CCDC188H7C350 402 aa10.96□□□□□ -0.66
PTPRM-203ENST00000400060 PSMD14O00487 310 aa10.96□□□□□ -0.66
PTPRM-203ENST00000400060 SAMD9LQ8IVG5 1584 aa10.96□□□□□ -0.66
PTPRM-203ENST00000400060 LRRC8CQ8TDW0 803 aa10.96□□□□□ -0.66
PTPRM-203ENST00000400060 TAF1DQ9H5J8 278 aaPredicted RBP10.96□□□□□ -0.66
PTPRM-203ENST00000400060 SMIM23A6NLE4 172 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 MAPK13O15264 365 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 CYLC2Q14093 348 aaPredicted RBP10.95□□□□□ -0.66
PTPRM-203ENST00000400060 RTN1Q16799 776 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 ANKRD20A3Q5VUR7 823 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 HS2ST1Q7LGA3 356 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 UBL4BQ8N7F7 174 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 CCDC194A0A1B0GVG4 234 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms