RNA–Protein interactions for RNA: ENST00000398776.1

CAPN11-201, Transcript of calpain 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN11, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-201ENST00000398776 RNF26Q9BY78 433 aaPredicted RBP11.17□□□□□ -0.62
CAPN11-201ENST00000398776 HPSEQ9Y251 543 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 ATXN2Q99700 1313 aaKnown RBP11.17□□□□□ -0.62
CAPN11-201ENST00000398776 PRPF6O94906 941 aaKnown RBP11.17□□□□□ -0.62
CAPN11-201ENST00000398776 CCDC175P0C221 793 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 VSNL1P62760 191 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 MAP2K1Q02750 393 aaPredicted RBP11.17□□□□□ -0.62
CAPN11-201ENST00000398776 PDE4BQ07343 736 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 GBP6Q6ZN66 633 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 CPLX3Q8WVH0 158 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 ATP8A2Q9NTI2 1148 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 TUBE1Q9UJT0 475 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 USP21Q9UK80 565 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 FAM169AQ9Y6X4 670 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 TNKSO95271 1327 aa11.17□□□□□ -0.62
CAPN11-201ENST00000398776 MINDY4BA8MYZ0 360 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 UBAP1LF5GYI3 381 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 CALM1P0DP23 149 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 CALM2P0DP24 149 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 CALM3P0DP25 149 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 ERCC3P19447 782 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 TM4SF1P30408 202 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 KCNQ4P56696 695 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 RILPL1Q5EBL4 403 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 ZNF569Q5MCW4 686 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 GIMAP7Q8NHV1 300 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 ZNF384Q8TF68 577 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 SGSM3Q96HU1 749 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 SRP68Q9UHB9 627 aaKnown RBP11.16□□□□□ -0.62
CAPN11-201ENST00000398776 MCM8Q9UJA3 840 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 CDC23Q9UJX2 597 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 ORC4O43929 436 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 KIF5CO60282 957 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 LIG3P49916 1009 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 TBX2Q13207 712 aaPredicted RBP11.16□□□□□ -0.62
CAPN11-201ENST00000398776 NEDD9Q14511 834 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 RESP18Q5W5W9 173 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 SPTY2D1Q68D10 685 aaPredicted RBP11.16□□□□□ -0.62
CAPN11-201ENST00000398776 PTF1AQ7RTS3 328 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 IQCA1Q86XH1 822 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 FOXP4Q8IVH2 680 aaPredicted RBP11.16□□□□□ -0.62
CAPN11-201ENST00000398776 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
CAPN11-201ENST00000398776 CLIC6Q96NY7 704 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 ZSCAN10Q96SZ4 725 aaPredicted RBP11.16□□□□□ -0.62
CAPN11-201ENST00000398776 ZKSCAN3Q9BRR0 538 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 CRNKL1Q9BZJ0 848 aaKnown RBP11.16□□□□□ -0.62
CAPN11-201ENST00000398776 PCDHA5Q9Y5H7 936 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 IRS2Q9Y4H2 1338 aa11.16□□□□□ -0.62
CAPN11-201ENST00000398776 TMCO5BA8MYB1 307 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 EBAG9O00559 213 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 SYF2O95926 243 aaKnown RBP11.15□□□□□ -0.62
CAPN11-201ENST00000398776 ELF1P32519 619 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 LONRF3Q496Y0 759 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 SBK1Q52WX2 424 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 SHC4Q6S5L8 630 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 TRMT44Q8IYL2 757 aaKnown RBP11.15□□□□□ -0.62
CAPN11-201ENST00000398776 WTIPA6NIX2 430 aaPredicted RBP11.15□□□□□ -0.62
CAPN11-201ENST00000398776 LRRIQ3A6PVS8 624 aaPredicted RBP11.15□□□□□ -0.62
CAPN11-201ENST00000398776 FOXN1O15353 648 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 RNF40O75150 1001 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 XBP1P17861 261 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 ADRA2BP18089 450 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 DYNLL1P63167 89 aaKnown RBP11.15□□□□□ -0.62
CAPN11-201ENST00000398776 MECOMQ03112 1051 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 FBXW10Q5XX13 1052 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 DIS3L2Q8IYB7 885 aaKnown RBP11.15□□□□□ -0.62
CAPN11-201ENST00000398776 ENAHQ8N8S7 591 aaPredicted RBP11.15□□□□□ -0.62
CAPN11-201ENST00000398776 RNF217Q8TC41 542 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 CABS1Q96KC9 395 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.15□□□□□ -0.62
CAPN11-201ENST00000398776 NFE2L3Q9Y4A8 694 aa11.15□□□□□ -0.62
CAPN11-201ENST00000398776 DDAH1O94760 285 aa11.15□□□□□ -0.63
CAPN11-201ENST00000398776 BMP6P22004 513 aa11.15□□□□□ -0.63
CAPN11-201ENST00000398776 SPECC1Q5M775 1068 aa11.15□□□□□ -0.63
CAPN11-201ENST00000398776 WDR93Q6P2C0 686 aa11.15□□□□□ -0.63
CAPN11-201ENST00000398776 CATIPQ7Z7H3 387 aa11.15□□□□□ -0.63
CAPN11-201ENST00000398776 METTL16Q86W50 562 aaKnown RBP11.15□□□□□ -0.63
CAPN11-201ENST00000398776 KRI1Q8N9T8 703 aaKnown RBP11.15□□□□□ -0.63
CAPN11-201ENST00000398776 FAXDC2Q96IV6 333 aa11.15□□□□□ -0.63
CAPN11-201ENST00000398776 ARPP21Q9UBL0 812 aaPredicted RBP11.15□□□□□ -0.63
CAPN11-201ENST00000398776 LEMD3Q9Y2U8 911 aa11.15□□□□□ -0.63
CAPN11-201ENST00000398776 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
CAPN11-201ENST00000398776 PRPF3O43395 683 aaKnown RBP11.14□□□□□ -0.63
CAPN11-201ENST00000398776 SCP2P22307 547 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 INPP5BP32019 993 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 GUCY1A2P33402 732 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 FNTAP49354 379 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 PREPLQ4J6C6 727 aaPredicted RBP11.14□□□□□ -0.63
CAPN11-201ENST00000398776 TRAPPC3LQ5T215 181 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 IFIT1BQ5T764 474 aaKnown RBP11.14□□□□□ -0.63
CAPN11-201ENST00000398776 C15orf52Q6ZUT6 534 aaKnown RBP11.14□□□□□ -0.63
CAPN11-201ENST00000398776 AMOTL1Q8IY63 956 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 ZNF579Q8NAF0 562 aaKnown RBP11.14□□□□□ -0.63
CAPN11-201ENST00000398776 CEP131Q9UPN4 1083 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 CTAGE9A4FU28 777 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 BTBD18B2RXH4 712 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 CHUKO15111 745 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
CAPN11-201ENST00000398776 RFC4P35249 363 aa11.14□□□□□ -0.63
CAPN11-201ENST00000398776 AKAP17AQ02040 695 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms