RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 RPAP3Q9H6T3 665 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-202ENST00000396172 GPCPD1Q9NPB8 672 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 EMILIN3Q9NT22 766 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 FAM217BQ9NTX9 383 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-202ENST00000396172 PNMA3Q9UL41 463 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 PNMA2Q9UL42 364 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 USP17L15C9J2P7 530 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 USP17L13C9JLJ4 530 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 TMEM232C9JQI7 657 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 USP17L11C9JVI0 530 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 USP17L18D6R9N7 530 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 USP17L22D6RA61 530 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 USP17L17D6RBQ6 530 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 USP17L19D6RCP7 530 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 USP17L20D6RJB6 530 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 PLEKHA8P1O95397 391 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 SLC10A3P09131 477 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 GOLGA8HP0CJ92 632 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 XBP1P17861 261 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 USP17L24Q0WX57 530 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 ST3GAL1Q11201 340 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 SYDE2Q5VT97 1194 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 STAG2Q8N3U4 1231 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 SLF1Q9BQI6 1058 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 RIOX1Q9H6W3 641 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 AGTPBP1Q9UPW5 1226 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 SLC45A1Q9Y2W3 748 aa11.44□□□□□ -0.58
DDX39B-202ENST00000396172 MANSC4A6NHS7 340 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-202ENST00000396172 PRPF3O43395 683 aaKnown RBP11.43□□□□□ -0.58
DDX39B-202ENST00000396172 SRBD1Q8N5C6 995 aaKnown RBP11.43□□□□□ -0.58
DDX39B-202ENST00000396172 PRPF38AQ8NAV1 312 aaKnown RBP11.43□□□□□ -0.58
DDX39B-202ENST00000396172 RGS22Q8NE09 1264 aa11.43□□□□□ -0.58
DDX39B-202ENST00000396172 GTF3C2Q8WUA4 911 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-202ENST00000396172 SLC26A6Q9BXS9 759 aa11.43□□□□□ -0.58
DDX39B-202ENST00000396172 ORC3Q9UBD5 711 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-202ENST00000396172 SMCHD1A6NHR9 2005 aa11.43□□□□□ -0.58
DDX39B-202ENST00000396172 FLOT1O75955 427 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 GJB2P29033 226 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 GJA5P36382 358 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 RASGRP2Q7LDG7 609 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 NUP88Q99567 741 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-202ENST00000396172 CTDP1Q9Y5B0 961 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-202ENST00000396172 CCL15-CCL14A0A0B4J2E2 113 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 CTDNEP1O95476 244 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 OSBPP22059 807 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 HOXA7P31268 230 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-202ENST00000396172 INHBEP58166 350 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 IRX3P78415 501 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-202ENST00000396172 FUT2Q10981 343 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 SREBF2Q12772 1141 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 CCL15Q16663 113 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 KIAA1755Q5JYT7 1200 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 NBPF11Q86T75 865 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 REM2Q8IYK8 340 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-202ENST00000396172 ADGRF4Q8IZF3 695 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 CCDC12Q8WUD4 166 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-202ENST00000396172 PHKBQ93100 1093 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 ZCCHC17Q9NP64 241 aaKnown RBP11.42□□□□□ -0.58
DDX39B-202ENST00000396172 PPP1R9AQ9ULJ8 1098 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 ZNFX1Q9P2E3 1918 aaKnown RBP11.42□□□□□ -0.58
DDX39B-202ENST00000396172 MGAMO43451 1857 aa11.42□□□□□ -0.58
DDX39B-202ENST00000396172 PLXNB2O15031 1838 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 RASSF10A6NK89 507 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 ZBTB5O15062 677 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 TRIM29Q14134 588 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 COG2Q14746 738 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 CATSPERGQ6ZRH7 1159 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
DDX39B-202ENST00000396172 ANKRD23Q86SG2 305 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 CCDC82Q8N4S0 544 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 CCDC148Q8NFR7 591 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 PRR12Q9ULL5 1215 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 PNMA6FA0A0J9YX94 578 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 JAK2O60674 1132 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 SCG2P13521 617 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 CDC37Q16543 378 aaPredicted RBP11.41□□□□□ -0.58
DDX39B-202ENST00000396172 PFKFB3Q16875 520 aaPredicted RBP11.41□□□□□ -0.58
DDX39B-202ENST00000396172 OTUD7BQ6GQQ9 843 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 PPP1R18Q6NYC8 613 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 MB21D1Q8N884 522 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 KIFC2Q96AC6 838 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 MTMR8Q96EF0 704 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 DDX11Q96FC9 970 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 UBA5Q9GZZ9 404 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 SH3GLB2Q9NR46 395 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 HOXC10Q9NYD6 342 aa11.41□□□□□ -0.58
DDX39B-202ENST00000396172 TCHHQ07283 1943 aa11.4□□□□□ -0.58
DDX39B-202ENST00000396172 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-202ENST00000396172 CYTH3O43739 400 aa11.4□□□□□ -0.58
DDX39B-202ENST00000396172 ZBED4O75132 1171 aa11.4□□□□□ -0.58
DDX39B-202ENST00000396172 SLC16A2P36021 539 aa11.4□□□□□ -0.58
DDX39B-202ENST00000396172 NOGQ13253 232 aa11.4□□□□□ -0.58
DDX39B-202ENST00000396172 TTBK2Q6IQ55 1244 aa11.4□□□□□ -0.58
DDX39B-202ENST00000396172 HOMER1Q86YM7 354 aa11.4□□□□□ -0.58
DDX39B-202ENST00000396172 CMTR1Q8N1G2 835 aaKnown RBP11.4□□□□□ -0.58
DDX39B-202ENST00000396172 MS4A4AQ96JQ5 239 aa11.4□□□□□ -0.58
DDX39B-202ENST00000396172 ALG1Q9BT22 464 aa11.4□□□□□ -0.58
DDX39B-202ENST00000396172 RANBP17Q9H2T7 1088 aaKnown RBP11.4□□□□□ -0.58
DDX39B-202ENST00000396172 JMJD4Q9H9V9 463 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms