RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 GSTO1P78417 241 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 SLC7A5Q01650 507 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 AKNAD1Q5T1N1 836 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 NBPF6Q5VWK0 638 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 NAA35Q5VZE5 725 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 ZNF710Q8N1W2 664 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 NBPF4Q96M43 638 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 NOVA2Q9UNW9 492 aaKnown RBP17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 CFAP65Q6ZU64 1925 aaKnown RBP17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 KAT6BQ8WYB5 2073 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 GGCXP38435 758 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 SLMAPQ14BN4 828 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 KIFAP3Q92845 792 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 LRRC59Q96AG4 307 aaKnown RBP17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 TADA3O75528 432 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 TUBGCP2Q9BSJ2 902 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 HMGB1P1B2RPK0 211 aaPredicted RBP17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 CYP21A2P08686 494 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 H2AFZP0C0S5 128 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 H2AFVQ71UI9 128 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 CCDC97Q96F63 343 aaPredicted RBP17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 ZNF594Q96JF6 807 aaPredicted RBP17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 YIPF3Q9GZM5 350 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 KDM5DQ9BY66 1539 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 SMYD4Q8IYR2 804 aaPredicted RBP17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 ARMC2Q8NEN0 867 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 CARMIL3Q8ND23 1372 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 EVI5O60447 810 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 RPN1P04843 607 aaKnown RBP17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 KRT5P13647 590 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 STAT1P42224 750 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 TOGARAM2Q6ZUX3 1019 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 CCHCR1Q8TD31 782 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 SUDS3Q9H7L9 328 aaPredicted RBP17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 ATP8A1Q9Y2Q0 1164 aa17.11■□□□□ 0.33
SPOCK1-202ENST00000394945 CALUO43852 315 aaPredicted RBP17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 NGLY1Q96IV0 654 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 PGBD1Q96JS3 809 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 SKIP12755 728 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 VPS41P49754 854 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 CNOT10Q9H9A5 744 aaKnown RBP17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 ZMYM6O95789 1325 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 B4DLN1 442 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 BRD2P25440 801 aaKnown RBP17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 ARL1P40616 181 aaPredicted RBP17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 GCKRQ14397 625 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 SCYL3Q8IZE3 742 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 CMTR1Q8N1G2 835 aaKnown RBP17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 P3H4Q92791 437 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 KIF2CQ99661 725 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 RNF14Q9UBS8 474 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 AGTPBP1Q9UPW5 1226 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 FAM170AA1A519 330 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 PPFIA2O75334 1257 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 POLR2FP61218 127 aaKnown RBP17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 HSP90AA5PQ58FG0 334 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 WHAMMQ8TF30 809 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 SUFUQ9UMX1 484 aa17.1■□□□□ 0.33
SPOCK1-202ENST00000394945 RNMTO43148 476 aaKnown RBP17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 THAP12O43422 761 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 ZAP70P43403 619 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 DHX9Q08211 1270 aaKnown RBP17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 MAP3K21Q5TCX8 1036 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 PPP1R21Q6ZMI0 780 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 PSMD1Q99460 953 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 ADGRL2O95490 1459 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 FBXO41Q8TF61 875 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 RUNDC3BQ96NL0 473 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 PARP1P09874 1014 aaKnown RBP17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 ZNF654Q8IZM8 581 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 LRRC8CQ8TDW0 803 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 C6orf229H3BNL8 230 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 MRPL12P52815 198 aaKnown RBP17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 CYP27A1Q02318 531 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 LGSNQ5TDP6 509 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 GRAMD1CQ8IYS0 662 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 MAIP1Q8WWC4 291 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 SPDL1Q96EA4 605 aa17.09■□□□□ 0.33
SPOCK1-202ENST00000394945 MRPS25P82663 173 aaKnown RBP17.08■□□□□ 0.33
SPOCK1-202ENST00000394945 TRAF1Q13077 416 aa17.08■□□□□ 0.33
SPOCK1-202ENST00000394945 IRS4O14654 1257 aaPredicted RBP17.08■□□□□ 0.32
SPOCK1-202ENST00000394945 RETREG2Q8NC44 543 aa17.08■□□□□ 0.32
SPOCK1-202ENST00000394945 PRDM4Q9UKN5 801 aa17.08■□□□□ 0.32
SPOCK1-202ENST00000394945 NFU1Q9UMS0 254 aa17.08■□□□□ 0.32
SPOCK1-202ENST00000394945 ABCC1P33527 1531 aa17.08■□□□□ 0.32
SPOCK1-202ENST00000394945 EEF1GP26641 437 aaKnown RBP17.08■□□□□ 0.32
SPOCK1-202ENST00000394945 KIF23Q02241 960 aaPredicted RBP17.08■□□□□ 0.32
SPOCK1-202ENST00000394945 MIER3Q7Z3K6 550 aa17.08■□□□□ 0.32
SPOCK1-202ENST00000394945 KRT25Q7Z3Z0 450 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms