RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 STX17P56962 302 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 SPTY2D1Q68D10 685 aaPredicted RBP17.49■□□□□ 0.39
CPSF7-202ENST00000394888 CERS5Q8N5B7 392 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 TBC1D16Q8TBP0 767 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 ZMYND12Q9H0C1 365 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 SLX4Q8IY92 1834 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 GOLGA8HP0CJ92 632 aa17.48■□□□□ 0.39
CPSF7-202ENST00000394888 XBP1P17861 261 aa17.48■□□□□ 0.39
CPSF7-202ENST00000394888 CDK8P49336 464 aa17.48■□□□□ 0.39
CPSF7-202ENST00000394888 TPM4P67936 248 aa17.48■□□□□ 0.39
CPSF7-202ENST00000394888 MMTAG2Q9BU76 263 aaKnown RBP17.48■□□□□ 0.39
CPSF7-202ENST00000394888 BMP15O95972 392 aa17.48■□□□□ 0.39
CPSF7-202ENST00000394888 NLRP5P59047 1200 aa17.48■□□□□ 0.39
CPSF7-202ENST00000394888 ELF2Q15723 593 aa17.48■□□□□ 0.39
CPSF7-202ENST00000394888 LIMA1Q9UHB6 759 aaKnown RBP17.48■□□□□ 0.39
CPSF7-202ENST00000394888 FXR1P51114 621 aaKnown RBP eCLIP17.48■□□□□ 0.39
CPSF7-202ENST00000394888 KARSQ15046 597 aaKnown RBP17.48■□□□□ 0.39
CPSF7-202ENST00000394888 GDAQ9Y2T3 454 aa17.48■□□□□ 0.39
CPSF7-202ENST00000394888 TNS1Q9HBL0 1735 aaKnown RBP17.47■□□□□ 0.39
CPSF7-202ENST00000394888 STX10O60499 249 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 AKAP17AQ02040 695 aaKnown RBP17.47■□□□□ 0.39
CPSF7-202ENST00000394888 RBL2Q08999 1139 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 KIF18AQ8NI77 898 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 ERO1AQ96HE7 468 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 SPZ1Q9BXG8 430 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 KAT14Q9H8E8 782 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 SOWAHDA6NJG2 315 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 RASSF10A6NK89 507 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 ARHGAP6O43182 974 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 ADRA2BP18089 450 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 NT5C2P49902 561 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 DDX4Q9NQI0 724 aaKnown RBP17.47■□□□□ 0.39
CPSF7-202ENST00000394888 KBTBD4Q9NVX7 518 aa17.47■□□□□ 0.39
CPSF7-202ENST00000394888 NEDD1Q8NHV4 660 aa17.46■□□□□ 0.39
CPSF7-202ENST00000394888 DISC1Q9NRI5 854 aa17.46■□□□□ 0.39
CPSF7-202ENST00000394888 LONP1P36776 959 aaKnown RBP17.46■□□□□ 0.39
CPSF7-202ENST00000394888 BAG1Q99933 345 aaPredicted RBP17.46■□□□□ 0.39
CPSF7-202ENST00000394888 DDX41Q9UJV9 622 aaKnown RBP17.46■□□□□ 0.39
CPSF7-202ENST00000394888 CTNND2Q9UQB3 1225 aa17.46■□□□□ 0.39
CPSF7-202ENST00000394888 GTPBP6O43824 516 aaPredicted RBP17.46■□□□□ 0.39
CPSF7-202ENST00000394888 PRCPP42785 496 aa17.46■□□□□ 0.39
CPSF7-202ENST00000394888 KRT31Q15323 416 aa17.46■□□□□ 0.39
CPSF7-202ENST00000394888 CEP95Q96GE4 821 aa17.46■□□□□ 0.39
CPSF7-202ENST00000394888 ITIH6Q6UXX5 1313 aa17.46■□□□□ 0.39
CPSF7-202ENST00000394888 SNHG28P0DPA3 235 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 ZNF804AQ7Z570 1209 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 PANX2Q96RD6 677 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 HOOK1Q9UJC3 728 aaKnown RBP17.45■□□□□ 0.38
CPSF7-202ENST00000394888 SERPINB2P05120 415 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 USP5P45974 858 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 DESI2Q9BSY9 194 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 IRX2Q9BZI1 471 aaPredicted RBP17.45■□□□□ 0.38
CPSF7-202ENST00000394888 RWDD2AQ9UIY3 292 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.45■□□□□ 0.384e-11■■□□□ 12.6
CPSF7-202ENST00000394888 PPP1R11O60927 126 aaPredicted RBP17.45■□□□□ 0.38
CPSF7-202ENST00000394888 UFL1O94874 794 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 SLU7O95391 586 aaKnown RBP17.45■□□□□ 0.38
CPSF7-202ENST00000394888 SLURP2P0DP57 97 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 ERVK-24P63145 666 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 INF2Q27J81 1249 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 PRDM4Q9UKN5 801 aa17.45■□□□□ 0.38
CPSF7-202ENST00000394888 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 SPDYE4A6NLX3 237 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 UBAP1LF5GYI3 381 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 ZNF658Q5TYW1 1059 aaPredicted RBP17.44■□□□□ 0.38
CPSF7-202ENST00000394888 DAGLAQ9Y4D2 1042 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 SMCHD1A6NHR9 2005 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 KIF5BP33176 963 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 USP17L2Q6R6M4 530 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 ADSSL1Q8N142 457 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 DACH1Q9UI36 760 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 TRIM49BA6NDI0 452 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 MFAP3LO75121 409 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 RPN1P04843 607 aaKnown RBP17.44■□□□□ 0.38
CPSF7-202ENST00000394888 ERCC6LQ2NKX8 1250 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 ZNF507Q8TCN5 953 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 RIOX1Q9H6W3 641 aa17.44■□□□□ 0.38
CPSF7-202ENST00000394888 KIF2AO00139 706 aaPredicted RBP17.43■□□□□ 0.38
CPSF7-202ENST00000394888 TADA3O75528 432 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 DHX8Q14562 1220 aaKnown RBP17.43■□□□□ 0.38
CPSF7-202ENST00000394888 SEPT12Q8IYM1 358 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 CCSER1Q9C0I3 900 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 AFF2P51816 1311 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 TSPY3P0CV98 308 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 TSPY8P0CW00 308 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 MAP3K9P80192 1104 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 KLHL10Q6JEL2 608 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 IQUBQ8NA54 791 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 PRPHP41219 470 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 CLEC10AQ8IUN9 316 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 DUSP9Q99956 384 aaKnown RBP17.43■□□□□ 0.38
CPSF7-202ENST00000394888 REXO2Q9Y3B8 237 aaKnown RBP17.43■□□□□ 0.38
CPSF7-202ENST00000394888 ADGRG1Q9Y653 693 aa17.43■□□□□ 0.38
CPSF7-202ENST00000394888 UTRNP46939 3433 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 KLRF2D3W0D1 207 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 ATP2B4P23634 1241 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 CALML3P27482 149 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 GSTO1P78417 241 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 EYA3Q99504 573 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 BRMS1Q9HCU9 246 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms