RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 FOSL2P15408 326 aa18.47■□□□□ 0.55
CHMP3-202ENST00000393773 ACLYP53396 1101 aa18.47■□□□□ 0.55
CHMP3-202ENST00000393773 FPGSQ05932 587 aa18.47■□□□□ 0.55
CHMP3-202ENST00000393773 ANKRD33Q7Z3H0 272 aa18.47■□□□□ 0.55
CHMP3-202ENST00000393773 NUP88Q99567 741 aaPredicted RBP18.47■□□□□ 0.55
CHMP3-202ENST00000393773 CNPY2Q9Y2B0 182 aa18.47■□□□□ 0.55
CHMP3-202ENST00000393773 DNAJC25-GNG10A0A024R161 153 aa18.46■□□□□ 0.55
CHMP3-202ENST00000393773 RAG1P15918 1043 aa18.46■□□□□ 0.55
CHMP3-202ENST00000393773 FAAP100Q0VG06 881 aa18.46■□□□□ 0.55
CHMP3-202ENST00000393773 CCSAPQ6IQ19 270 aaPredicted RBP18.46■□□□□ 0.55
CHMP3-202ENST00000393773 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.55
CHMP3-202ENST00000393773 DDRGK1Q96HY6 314 aa18.46■□□□□ 0.55
CHMP3-202ENST00000393773 TOX2Q96NM4 488 aa18.46■□□□□ 0.55
CHMP3-202ENST00000393773 SLF1Q9BQI6 1058 aa18.46■□□□□ 0.55
CHMP3-202ENST00000393773 TSEN34Q9BSV6 310 aaKnown RBP18.46■□□□□ 0.55
CHMP3-202ENST00000393773 TEX13BQ9BXU2 312 aa18.46■□□□□ 0.55
CHMP3-202ENST00000393773 BCL11AQ9H165 835 aa18.46■□□□□ 0.55
CHMP3-202ENST00000393773 DDX19BQ9UMR2 479 aa18.46■□□□□ 0.55
CHMP3-202ENST00000393773 MYADML2A6NDP7 307 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 ADCY6O43306 1168 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 SNAI1O95863 264 aaPredicted RBP18.45■□□□□ 0.54
CHMP3-202ENST00000393773 RASA1P20936 1047 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 SNRNP48Q6IEG0 339 aaKnown RBP18.45■□□□□ 0.54
CHMP3-202ENST00000393773 MAMDC4Q6UXC1 1216 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.45■□□□□ 0.54
CHMP3-202ENST00000393773 KLHDC9Q8NEP7 349 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 FGD4Q96M96 766 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 STARD7Q9NQZ5 370 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 TMEM39AQ9NV64 488 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 TBX21Q9UL17 535 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 COG6Q9Y2V7 657 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 RIPK3Q9Y572 518 aa18.45■□□□□ 0.54
CHMP3-202ENST00000393773 MOXD2PA6NHM9 499 aa18.44■□□□□ 0.54
CHMP3-202ENST00000393773 RAD21O60216 631 aa18.44■□□□□ 0.54
CHMP3-202ENST00000393773 NDUFB10O96000 172 aa18.44■□□□□ 0.54
CHMP3-202ENST00000393773 CST5P28325 142 aaPredicted RBP18.44■□□□□ 0.54
CHMP3-202ENST00000393773 IGKV6D-41A0A0C4DH26 115 aa18.43■□□□□ 0.54
CHMP3-202ENST00000393773 ATP2A1O14983 1001 aa18.43■□□□□ 0.54
CHMP3-202ENST00000393773 MS4A1P11836 297 aa18.43■□□□□ 0.54
CHMP3-202ENST00000393773 DNAJB2P25686 324 aa18.43■□□□□ 0.54
CHMP3-202ENST00000393773 SBK1Q52WX2 424 aa18.43■□□□□ 0.54
CHMP3-202ENST00000393773 ZSCAN25Q6NSZ9 544 aa18.43■□□□□ 0.54
CHMP3-202ENST00000393773 ZNF467Q7Z7K2 595 aaPredicted RBP18.43■□□□□ 0.54
CHMP3-202ENST00000393773 STRBPQ96SI9 672 aaKnown RBP18.43■□□□□ 0.54
CHMP3-202ENST00000393773 NYAP2Q9P242 653 aa18.43■□□□□ 0.54
CHMP3-202ENST00000393773 ZHX1Q9UKY1 873 aaPredicted RBP18.43■□□□□ 0.54
CHMP3-202ENST00000393773 TRANK1O15050 2925 aa18.43■□□□□ 0.54
CHMP3-202ENST00000393773 GSG1L2A8MUP6 293 aa18.42■□□□□ 0.54
CHMP3-202ENST00000393773 DUSP11O75319 330 aaKnown RBP18.42■□□□□ 0.54
CHMP3-202ENST00000393773 IRX5P78411 483 aaPredicted RBP18.42■□□□□ 0.54
CHMP3-202ENST00000393773 KCNA10Q16322 511 aa18.42■□□□□ 0.54
CHMP3-202ENST00000393773 USP38Q8NB14 1042 aa18.42■□□□□ 0.54
CHMP3-202ENST00000393773 NUP133Q8WUM0 1156 aa18.42■□□□□ 0.54
CHMP3-202ENST00000393773 EPB41L4AQ9HCS5 686 aaPredicted RBP18.42■□□□□ 0.54
CHMP3-202ENST00000393773 FAM184BQ9ULE4 1060 aa18.42■□□□□ 0.54
CHMP3-202ENST00000393773 PLIN4Q96Q06 1357 aa18.42■□□□□ 0.54
CHMP3-202ENST00000393773 MYO9BQ13459 2157 aa18.41■□□□□ 0.54
CHMP3-202ENST00000393773 DCDC2CA8MYV0 355 aa18.41■□□□□ 0.54
CHMP3-202ENST00000393773 F5H6K3 240 aa18.41■□□□□ 0.54
CHMP3-202ENST00000393773 TIMP1P01033 207 aa18.41■□□□□ 0.54
CHMP3-202ENST00000393773 KLRC3Q07444 240 aa18.41■□□□□ 0.54
CHMP3-202ENST00000393773 GRIN2CQ14957 1233 aa18.41■□□□□ 0.54
CHMP3-202ENST00000393773 PRPF38AQ8NAV1 312 aaKnown RBP18.41■□□□□ 0.54
CHMP3-202ENST00000393773 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHMP3-202ENST00000393773 UPF3AQ9H1J1 476 aaKnown RBP18.41■□□□□ 0.54
CHMP3-202ENST00000393773 SLC38A10Q9HBR0 1119 aa18.41■□□□□ 0.54
CHMP3-202ENST00000393773 GIMAP6Q6P9H5 292 aa18.4■□□□□ 0.54
CHMP3-202ENST00000393773 DDX11Q96FC9 970 aa18.4■□□□□ 0.54
CHMP3-202ENST00000393773 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
CHMP3-202ENST00000393773 KATNBL1Q9H079 304 aa18.4■□□□□ 0.54
CHMP3-202ENST00000393773 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.4■□□□□ 0.54
CHMP3-202ENST00000393773 ELP1O95163 1332 aa18.4■□□□□ 0.54
CHMP3-202ENST00000393773 MROH7Q68CQ1 1323 aa18.4■□□□□ 0.54
CHMP3-202ENST00000393773 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.39■□□□□ 0.53
CHMP3-202ENST00000393773 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.39■□□□□ 0.53
CHMP3-202ENST00000393773 SMARCA5O60264 1052 aaPredicted RBP18.39■□□□□ 0.53
CHMP3-202ENST00000393773 CDK7P50613 346 aa18.39■□□□□ 0.53
CHMP3-202ENST00000393773 ACVR2BQ13705 512 aa18.39■□□□□ 0.53
CHMP3-202ENST00000393773 RASIP1Q5U651 963 aa18.39■□□□□ 0.53
CHMP3-202ENST00000393773 MFSD5Q6N075 450 aa18.39■□□□□ 0.53
CHMP3-202ENST00000393773 STK11IPQ8N1F8 1099 aa18.39■□□□□ 0.53
CHMP3-202ENST00000393773 OSBP2Q969R2 916 aa18.39■□□□□ 0.53
CHMP3-202ENST00000393773 GLT1D1Q96MS3 346 aa18.39■□□□□ 0.53
CHMP3-202ENST00000393773 CTAGE5O15320 804 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 ASGR1P07306 291 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 C6orf222P0C671 652 aaPredicted RBP18.38■□□□□ 0.53
CHMP3-202ENST00000393773 GJA9P57773 515 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 CCDC144BQ3MJ40 725 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 C16orf59Q7L2K0 433 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 ARMCX2Q7L311 632 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 FAM126BQ8IXS8 530 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 CPXCR1Q8N123 301 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 KBTBD3Q8NAB2 608 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 APPBP2Q92624 585 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 TIFAQ96CG3 184 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 ABHD16BQ9H3Z7 469 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 MKNK2Q9HBH9 465 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 RAVER2Q9HCJ3 691 aaKnown RBP18.38■□□□□ 0.53
CHMP3-202ENST00000393773 SYNPO2Q9UMS6 1093 aa18.38■□□□□ 0.53
CHMP3-202ENST00000393773 TANC1Q9C0D5 1861 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms