RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TBC1D2BQ9UPU7 963 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 CTNND1O60716 968 aaKnown RBP8.42□□□□□ -1.06
VTI1A-201ENST00000393077 OPHN1O60890 802 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 SERPINB4P48594 390 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.42□□□□□ -1.06
VTI1A-201ENST00000393077 PSMB7Q99436 277 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.42□□□□□ -1.067e-9■■□□□ 12.4
VTI1A-201ENST00000393077 JAK2O60674 1132 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 CTNNA1P35221 906 aaKnown RBP8.42□□□□□ -1.06
VTI1A-201ENST00000393077 KRT9P35527 623 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 BICDL1Q6ZP65 573 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 ARHGEF25Q86VW2 580 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 MYD88Q99836 296 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 CENPKQ9BS16 269 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 TSC22D4Q9Y3Q8 395 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 FAM135BQ49AJ0 1406 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 TMEM232C9JQI7 657 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 M0R2C6 588 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 CHL1O00533 1208 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 RAD23BP54727 409 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 STX17P56962 302 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 TBC1D25Q3MII6 688 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 ADALQ6DHV7 355 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 TMEM110Q86TL2 294 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 SEC16BQ96JE7 1060 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 RNPC3Q96LT9 517 aaKnown RBP8.42□□□□□ -1.06
VTI1A-201ENST00000393077 HAUS4Q9H6D7 363 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 MAP3K2Q9Y2U5 619 aa8.42□□□□□ -1.06
VTI1A-201ENST00000393077 GLI2P10070 1586 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 BACH1O14867 736 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 C2orf54Q08AI8 447 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 AKAP4Q5JQC9 854 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 C6orf163Q5TEZ5 329 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 OLFML2BQ68BL8 750 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 CCNI2Q6ZMN8 369 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 ATL2Q8NHH9 583 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 ARHGEF2Q92974 986 aaKnown RBP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 TSPAN18Q96SJ8 248 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 PHAXQ9H814 394 aaKnown RBP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 DDX21Q9NR30 783 aaKnown RBP eCLIP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 ALKQ9UM73 1620 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 TARSL2A2RTX5 802 aaKnown RBP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 RTN2O75298 545 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 TRIM37O94972 964 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 CHGBP05060 677 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 CREB3L3Q68CJ9 461 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 ZC3H18Q86VM9 953 aaKnown RBP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 WDR75Q8IWA0 830 aaKnown RBP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 GALNT15Q8N3T1 639 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 NR1H4Q96RI1 486 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 LZTS2Q9BRK4 669 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 UBAC1Q9BSL1 405 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 MIS12Q9H081 205 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 ADGRG1Q9Y653 693 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 POLR1AO95602 1720 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 NDUFA8P51970 172 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 C1QTNF12Q5T7M4 302 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 AACSQ86V21 672 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 LZICQ8WZA0 190 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 USP6NLQ92738 828 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 CCDC51Q96ER9 411 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 CLMNQ96JQ2 1002 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 NEK1Q96PY6 1258 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 DDX23Q9BUQ8 820 aaKnown RBP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 MRPL44Q9H9J2 332 aaKnown RBP8.41□□□□□ -1.06
VTI1A-201ENST00000393077 TMOD3Q9NYL9 352 aa8.41□□□□□ -1.06
VTI1A-201ENST00000393077 SPDYE3A6NKU9 549 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 H0Y3Z8 333 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 OPLAHO14841 1288 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 LSM1O15116 133 aaKnown RBP8.4□□□□□ -1.06
VTI1A-201ENST00000393077 AKR1B10O60218 316 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 RASSF9O75901 435 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 RNF8O76064 485 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 SLC7A5Q01650 507 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 UBE4AQ14139 1066 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 PPP4R3CPQ6ZMV5 832 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 TRMT44Q8IYL2 757 aaKnown RBP8.4□□□□□ -1.06
VTI1A-201ENST00000393077 CEP70Q8NHQ1 597 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 IWS1Q96ST2 819 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 TM6SF1Q9BZW5 370 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 MAP3K5Q99683 1374 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 MRPS25P82663 173 aaKnown RBP8.4□□□□□ -1.06
VTI1A-201ENST00000393077 MTF1Q14872 753 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 ANKRD20A8PQ5CZ79 823 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 KIF6Q6ZMV9 814 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 LRRC2Q9BYS8 371 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 RCOR1Q9UKL0 485 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 PCDHGC5Q9Y5F6 944 aa8.4□□□□□ -1.06
VTI1A-201ENST00000393077 ATXN2Q99700 1313 aaKnown RBP8.4□□□□□ -1.06
VTI1A-201ENST00000393077 LGR5O75473 907 aa8.4□□□□□ -1.07
VTI1A-201ENST00000393077 KRT14P02533 472 aa8.4□□□□□ -1.07
VTI1A-201ENST00000393077 GNAT2P19087 354 aa8.4□□□□□ -1.07
VTI1A-201ENST00000393077 CCT6AP40227 531 aaKnown RBP8.4□□□□□ -1.07
VTI1A-201ENST00000393077 CRELD2Q6UXH1 353 aaPredicted RBP8.4□□□□□ -1.07
VTI1A-201ENST00000393077 RBM43Q6ZSC3 357 aaKnown RBP8.4□□□□□ -1.07
VTI1A-201ENST00000393077 PPP1R42Q7Z4L9 355 aa8.4□□□□□ -1.07
VTI1A-201ENST00000393077 ATP11CQ8NB49 1132 aa8.4□□□□□ -1.07
VTI1A-201ENST00000393077 ARL8AQ96BM9 186 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms