RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PLCB2Q00722 1185 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 CPLX2Q6PUV4 134 aaKnown RBP21.58■■□□□ 1.05
CCDC50-202ENST00000392456 NEDD1Q8NHV4 660 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 CEP95Q96GE4 821 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 ATP6V1DQ9Y5K8 247 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 MYO3BQ8WXR4 1341 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 FMNL1O95466 1100 aaPredicted RBP21.58■■□□□ 1.05
CCDC50-202ENST00000392456 SSRP1Q08945 709 aaKnown RBP21.58■■□□□ 1.05
CCDC50-202ENST00000392456 CIAPIN1Q6FI81 312 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 OGFOD1Q8N543 542 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 TMEM47Q9BQJ4 181 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 ZNF287Q9HBT7 754 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 TCP11L1Q9NUJ3 509 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 SCAF8Q9UPN6 1271 aaKnown RBP21.58■■□□□ 1.05
CCDC50-202ENST00000392456 ZRANB2O95218 330 aaKnown RBP eCLIP21.57■■□□□ 1.04
CCDC50-202ENST00000392456 CPP00450 1065 aa21.57■■□□□ 1.04
CCDC50-202ENST00000392456 EGFRP00533 1210 aa21.57■■□□□ 1.04
CCDC50-202ENST00000392456 RCAN1P53805 252 aa21.57■■□□□ 1.04
CCDC50-202ENST00000392456 ZSCAN29Q8IWY8 852 aaPredicted RBP21.57■■□□□ 1.04
CCDC50-202ENST00000392456 PNMA1Q8ND90 353 aa21.57■■□□□ 1.04
CCDC50-202ENST00000392456 FTOQ9C0B1 505 aaKnown RBP eCLIP21.57■■□□□ 1.04
CCDC50-202ENST00000392456 TCP10L2B9ZVM9 353 aa21.57■■□□□ 1.04
CCDC50-202ENST00000392456 REXO1L1PQ8IX06 675 aa21.57■■□□□ 1.04
CCDC50-202ENST00000392456 ANKS1AQ92625 1134 aa21.57■■□□□ 1.04
CCDC50-202ENST00000392456 KAT14Q9H8E8 782 aa21.57■■□□□ 1.04
CCDC50-202ENST00000392456 PSD3Q9NYI0 1048 aa21.57■■□□□ 1.04
CCDC50-202ENST00000392456 KIF28PB7ZC32 967 aa21.56■■□□□ 1.04
CCDC50-202ENST00000392456 DLGAP5Q15398 846 aa21.56■■□□□ 1.04
CCDC50-202ENST00000392456 TPD52L1Q16890 204 aaPredicted RBP21.56■■□□□ 1.04
CCDC50-202ENST00000392456 CCDC183Q5T5S1 534 aa21.56■■□□□ 1.04
CCDC50-202ENST00000392456 STAG2Q8N3U4 1231 aa21.56■■□□□ 1.04
CCDC50-202ENST00000392456 SRBD1Q8N5C6 995 aaKnown RBP21.56■■□□□ 1.04
CCDC50-202ENST00000392456 EIF3CLB5ME19 914 aaKnown RBP21.56■■□□□ 1.04
CCDC50-202ENST00000392456 DDAH1O94760 285 aa21.56■■□□□ 1.04
CCDC50-202ENST00000392456 SLU7O95391 586 aaKnown RBP21.56■■□□□ 1.04
CCDC50-202ENST00000392456 EIF6P56537 245 aaKnown RBP21.56■■□□□ 1.04
CCDC50-202ENST00000392456 AGBL3Q8NEM8 1001 aa21.56■■□□□ 1.04
CCDC50-202ENST00000392456 SHISA4Q96DD7 197 aa21.56■■□□□ 1.04
CCDC50-202ENST00000392456 EIF3CQ99613 913 aaKnown RBP21.56■■□□□ 1.04
CCDC50-202ENST00000392456 CDAN1Q8IWY9 1227 aa21.55■■□□□ 1.04
CCDC50-202ENST00000392456 HLA-DOAP06340 250 aa21.55■■□□□ 1.04
CCDC50-202ENST00000392456 VEGFAP15692 232 aaPredicted RBP21.55■■□□□ 1.04
CCDC50-202ENST00000392456 LRMPQ12912 555 aa21.55■■□□□ 1.04
CCDC50-202ENST00000392456 KRT40Q6A162 431 aa21.55■■□□□ 1.04
CCDC50-202ENST00000392456 ZNF70Q9UC06 446 aaPredicted RBP21.55■■□□□ 1.04
CCDC50-202ENST00000392456 HDAC9Q9UKV0 1011 aa21.55■■□□□ 1.04
CCDC50-202ENST00000392456 TMTC3Q6ZXV5 915 aa21.54■■□□□ 1.04
CCDC50-202ENST00000392456 TMEM87AQ8NBN3 555 aa21.54■■□□□ 1.04
CCDC50-202ENST00000392456 V9GY48 417 aaPredicted RBP21.54■■□□□ 1.04
CCDC50-202ENST00000392456 LTBP3Q9NS15 1303 aa21.54■■□□□ 1.04
CCDC50-202ENST00000392456 ACTN2P35609 894 aa21.54■■□□□ 1.04
CCDC50-202ENST00000392456 CEBPZQ03701 1054 aaKnown RBP21.54■■□□□ 1.04
CCDC50-202ENST00000392456 PKN1Q16512 942 aa21.54■■□□□ 1.04
CCDC50-202ENST00000392456 ZSCAN16Q9H4T2 348 aaPredicted RBP21.54■■□□□ 1.04
CCDC50-202ENST00000392456 PI4KBQ9UBF8 816 aa21.54■■□□□ 1.04
CCDC50-202ENST00000392456 SIPA1L1O43166 1804 aa21.54■■□□□ 1.04
CCDC50-202ENST00000392456 STK36Q9NRP7 1315 aa21.53■■□□□ 1.04
CCDC50-202ENST00000392456 SLC35G1Q2M3R5 365 aa21.53■■□□□ 1.04
CCDC50-202ENST00000392456 DHX36Q9H2U1 1008 aaKnown RBP21.53■■□□□ 1.04
CCDC50-202ENST00000392456 KCNJ14Q9UNX9 436 aa21.53■■□□□ 1.04
CCDC50-202ENST00000392456 CALM1P0DP23 149 aa21.53■■□□□ 1.04
CCDC50-202ENST00000392456 CALM2P0DP24 149 aa21.53■■□□□ 1.04
CCDC50-202ENST00000392456 CALM3P0DP25 149 aa21.53■■□□□ 1.04
CCDC50-202ENST00000392456 CTCFLQ8NI51 663 aaPredicted RBP21.53■■□□□ 1.04
CCDC50-202ENST00000392456 FUCA2Q9BTY2 467 aa21.53■■□□□ 1.04
CCDC50-202ENST00000392456 WNT10BO00744 389 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 NPM3O75607 178 aaKnown RBP21.52■■□□□ 1.04
CCDC50-202ENST00000392456 IVLP07476 585 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 GOLGA8HP0CJ92 632 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 INHBEP58166 350 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 RBM26Q5T8P6 1007 aaKnown RBP21.52■■□□□ 1.04
CCDC50-202ENST00000392456 TRIM22Q8IYM9 498 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 ITFG2Q969R8 447 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 EHD4Q9H223 541 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 CPVLQ9H3G5 476 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 VEZTQ9HBM0 779 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 MTMR4Q9NYA4 1195 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 SWAP70Q9UH65 585 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 MAD2L2Q9UI95 211 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 GJA3Q9Y6H8 435 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 FZD9O00144 591 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 KRT85P78386 507 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 KIF23Q02241 960 aaPredicted RBP21.52■■□□□ 1.04
CCDC50-202ENST00000392456 PPP2R5BQ15173 497 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 EXOC4Q96A65 974 aa21.52■■□□□ 1.04
CCDC50-202ENST00000392456 IGKV6D-41A0A0C4DH26 115 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 NOVP48745 357 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 NT5C2P49902 561 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 CORO7P57737 925 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 RRP1BQ14684 758 aaKnown RBP21.51■■□□□ 1.03
CCDC50-202ENST00000392456 SPDYE2Q495Y8 402 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 ARHGAP27Q6ZUM4 889 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 CCDC186Q7Z3E2 898 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 MYOZ2Q9NPC6 264 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 ZNF541Q9H0D2 1346 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 MPHOSPH10O00566 681 aaKnown RBP21.51■■□□□ 1.03
CCDC50-202ENST00000392456 ENTPD3O75355 529 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 JAG1P78504 1218 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 OTUD6BQ8N6M0 293 aa21.51■■□□□ 1.03
CCDC50-202ENST00000392456 ZBED3Q96IU2 234 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms