RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 MAP3K12Q12852 859 aa18.83■□□□□ 0.61
TRAF3IP1-202ENST00000391993 MRRFQ96E11 262 aaKnown RBP18.83■□□□□ 0.61
TRAF3IP1-202ENST00000391993 RAB21Q9UL25 225 aa18.83■□□□□ 0.61
TRAF3IP1-202ENST00000391993 PDHA1P08559 390 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 POLE2P56282 527 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 KIAA0753Q2KHM9 967 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 RUFY4Q6ZNE9 571 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 DYMQ7RTS9 669 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 PAGE5Q96GU1 130 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 SENP2Q9HC62 589 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TATP17735 454 aaPredicted RBP18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TMC4Q7Z404 712 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TRIML1Q8N9V2 468 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 SPATA4Q8NEY3 305 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 FAM89AQ96GI7 184 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TUBGCP2Q9BSJ2 902 aa18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 RBM28Q9NW13 759 aaKnown RBP18.83■□□□□ 0.6
TRAF3IP1-202ENST00000391993 GUCY1A2P33402 732 aa18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 CARSP49589 748 aaKnown RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 CTNNBL1Q8WYA6 563 aaPredicted RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ELAC2Q9BQ52 826 aaKnown RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 AP1M1Q9BXS5 423 aa18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 MLXIPLQ9NP71 852 aa18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 G3BP2Q9UN86 482 aaKnown RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ZMYM6O95789 1325 aa18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TMEM110-MUSTN1A8MSY1 372 aa18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 RNMTO43148 476 aaKnown RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TCP1P17987 556 aaKnown RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 SPATS2Q86XZ4 545 aaKnown RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ZKSCAN4Q969J2 545 aaPredicted RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 HVCN1Q96D96 273 aa18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 A0A1B0GTH6 734 aa18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ZSCAN5CA6NGD5 496 aaPredicted RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 EYA2O00167 538 aa18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ATP11AP98196 1134 aa18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 SEPT7Q16181 437 aaKnown RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 IFIT1BQ5T764 474 aaKnown RBP18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ATP8A1Q9Y2Q0 1164 aa18.82■□□□□ 0.6
TRAF3IP1-202ENST00000391993 DEXIO95424 95 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 GCFC2P16383 781 aaKnown RBP18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 METTL22Q9BUU2 404 aaPredicted RBP18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TSGA10Q9BZW7 698 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 AGPAT5Q9NUQ2 364 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ADD3Q9UEY8 706 aaKnown RBP18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ABCA6Q8N139 1617 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 H0Y3Z8 333 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 CUL4BQ13620 913 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 AKAP4Q5JQC9 854 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 CAPRIN2Q6IMN6 1127 aaKnown RBP18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 FAM114A1Q8IWE2 563 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 LACRTQ9GZZ8 138 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 REREQ9P2R6 1566 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 LAMC1P11047 1609 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 MAP3K4Q9Y6R4 1608 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 DIAPH2O60879 1101 aa18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.81■□□□□ 0.6
TRAF3IP1-202ENST00000391993 EIF4A3P38919 411 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 LRRC45Q96CN5 670 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TBC1D7Q9P0N9 293 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 EXOSC10Q01780 885 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 CYB5D1Q6P9G0 228 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 CCDC155Q8N6L0 562 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 CCDC197Q8NCU1 140 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 NSRP1Q9H0G5 558 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 BMP6P22004 513 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 PSMD2Q13200 908 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TCP11X2Q5H9J9 407 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 KLHL29Q96CT2 875 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 VIPAS39Q9H9C1 493 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ZNF609O15014 1411 aa18.8■□□□□ 0.6
TRAF3IP1-202ENST00000391993 VSIG1Q86XK7 387 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 MARCH10Q8NA82 808 aaPredicted RBP18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 NSMCE1Q8WV22 266 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 L3MBTL1Q9Y468 752 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TULP4Q9NRJ4 1543 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 IGKV5-2P06315 115 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 DTHD1Q6ZMT9 781 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 MIEF2Q96C03 454 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ZNF496Q96IT1 587 aaPredicted RBP18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 FBXO3Q9UK99 471 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 PRR36Q9H6K5 1346 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 RPN1P04843 607 aaKnown RBP18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 MAGOHP61326 146 aaKnown RBP18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 MAGOHBQ96A72 148 aaKnown RBP18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 NBPF3Q9H094 633 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 EPN3Q9H201 632 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ZNF532Q9HCE3 1301 aa18.79■□□□□ 0.6
TRAF3IP1-202ENST00000391993 GMNCA6NCL1 334 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 CCDC160A6NGH7 325 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 UPP2O95045 317 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 FGFR1OPO95684 399 aaKnown RBP18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 CD44P16070 742 aaKnown RBP18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 PTPREP23469 700 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 TAF11Q15544 211 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ALS2CLQ60I27 953 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 PPP1R12AO14974 1030 aaPredicted RBP18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 AMOTQ4VCS5 1084 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 EMBQ6PCB8 327 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 RASGRP4Q8TDF6 673 aa18.78■□□□□ 0.6
TRAF3IP1-202ENST00000391993 ABCC3O15438 1527 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms