RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 PFDN4Q9NQP4 134 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 SLC8A3P57103 927 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 PPARDQ03181 441 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 CTDSPL2Q05D32 466 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 E2F5Q15329 346 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 RSAD2Q8WXG1 361 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 RFC4P35249 363 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 SEPT2Q15019 361 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 TRIM42Q8IWZ5 723 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 NFATC2IPQ8NCF5 419 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 CLIC4Q9Y696 253 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 DNAJC8O75937 253 aaPredicted RBP18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 EIF3BP55884 814 aaKnown RBP18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 SLC39A14Q15043 492 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 NELFCDQ8IXH7 590 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 MYL10Q9BUA6 226 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 CUEDC2Q9H467 287 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 GOLGA8QA0A0J9YX86 632 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 GOLGA8OA6NCC3 632 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 GOLGA8NF8WBI6 632 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 ARHGEF18Q6ZSZ5 1173 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 MYCT1Q8N699 235 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 HAUS8Q9BT25 410 aa18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 YTHDC2Q9H6S0 1430 aaKnown RBP18.75■□□□□ 0.59
COL4A3BP-203ENST00000380494 H2AFZP0C0S5 128 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 NBPF9Q3BBW0 867 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 H2AFVQ71UI9 128 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 SH2D4AQ9H788 454 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 PPP1R1BQ9UD71 204 aaPredicted RBP18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 HEXIM1O94992 359 aaKnown RBP18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 KLHL29Q96CT2 875 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 VPS54Q9P1Q0 977 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 PPFIA2O75334 1257 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 ITGA6P23229 1130 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 TCP11Q8WWU5 503 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 METTL14Q9HCE5 456 aaKnown RBP18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 ZBTB21Q9ULJ3 1066 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 CHUKO15111 745 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 LMNAP02545 664 aaKnown RBP18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 NUP153P49790 1475 aaKnown RBP18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 MGEA5O60502 916 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 NR1D1P20393 614 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 IRX5P78411 483 aaPredicted RBP18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 PBKQ96KB5 322 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 ADGRL2O95490 1459 aa18.74■□□□□ 0.59
COL4A3BP-203ENST00000380494 LMNB2Q03252 620 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 PPP2R5AQ15172 486 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 C19orf44Q9H6X5 657 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 NOP53Q9NZM5 478 aaKnown RBP18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 ANGPTL2Q9UKU9 493 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 MORC2Q9Y6X9 1032 aaPredicted RBP18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 CCDC93Q567U6 631 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 EMBQ6PCB8 327 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 KCNG1Q9UIX4 513 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 TNRQ92752 1358 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 MAP3K7O43318 606 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 YWHAEP62258 255 aaKnown RBP18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 HELBQ8NG08 1087 aaPredicted RBP18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 STAMQ92783 540 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 EPB41L5Q9HCM4 733 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 TTC36A6NLP5 189 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 SERPINB6P35237 376 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 LPIN2Q92539 896 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 IWS1Q96ST2 819 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 ABCB6Q9NP58 842 aa18.73■□□□□ 0.59
COL4A3BP-203ENST00000380494 MED23Q9ULK4 1368 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 SCRN1Q12765 414 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 ANKRD35Q8N283 1001 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 NLRP7Q8WX94 980 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 A0A0D9SFI3 127 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 OGFOD1Q8N543 542 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 ZNF654Q8IZM8 581 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 VTI1AQ96AJ9 217 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 TBC1D7Q9P0N9 293 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 EIF3CLB5ME19 914 aaKnown RBP18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 CDAN1Q8IWY9 1227 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 IP6K1Q92551 441 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 MAP4K1Q92918 833 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 DHTKD1Q96HY7 919 aaPredicted RBP18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 EIF3CQ99613 913 aaKnown RBP18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 GPCPD1Q9NPB8 672 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 KDRP35968 1356 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 MROH5Q6ZUA9 1318 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 LMNB1P20700 586 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 POLR2FP61218 127 aaKnown RBP18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 DPCR1Q3MIW9 517 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 C10orf76Q5T2E6 689 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 CENPKQ9BS16 269 aa18.72■□□□□ 0.59
COL4A3BP-203ENST00000380494 ZNF532Q9HCE3 1301 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 PDIA3P30101 505 aaKnown RBP18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 GCKRQ14397 625 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 UHRF1BP1LA0JNW5 1464 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 KIF21AQ7Z4S6 1674 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 ARHGAP4P98171 946 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 BLIDQ8IZY5 108 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 TTC16Q8NEE8 873 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 ENOX1Q8TC92 643 aaKnown RBP18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 RCOR1Q9UKL0 485 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms