RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 MYH6P13533 1939 aa19.18■□□□□ 0.66
PHF1-202ENST00000374516 FAM237AA0A1B0GTK4 181 aa19.18■□□□□ 0.66
PHF1-202ENST00000374516 CHRNA5P30532 468 aa19.18■□□□□ 0.66
PHF1-202ENST00000374516 CERS3Q8IU89 383 aa19.18■□□□□ 0.66
PHF1-202ENST00000374516 WDR24Q96S15 920 aa19.18■□□□□ 0.66
PHF1-202ENST00000374516 DLEC1Q9Y238 1755 aa19.17■□□□□ 0.66
PHF1-202ENST00000374516 KRT2P35908 639 aa19.17■□□□□ 0.66
PHF1-202ENST00000374516 GNG11P61952 73 aa19.17■□□□□ 0.66
PHF1-202ENST00000374516 POTEAQ6S8J7 498 aa19.17■□□□□ 0.66
PHF1-202ENST00000374516 EYA3Q99504 573 aa19.17■□□□□ 0.66
PHF1-202ENST00000374516 BAG1Q99933 345 aaPredicted RBP19.17■□□□□ 0.66
PHF1-202ENST00000374516 ZCCHC17Q9NP64 241 aaKnown RBP19.17■□□□□ 0.66
PHF1-202ENST00000374516 INTS13Q9NVM9 706 aa19.17■□□□□ 0.66
PHF1-202ENST00000374516 KIF5BP33176 963 aa19.17■□□□□ 0.66
PHF1-202ENST00000374516 TBX2Q13207 712 aaPredicted RBP19.17■□□□□ 0.66
PHF1-202ENST00000374516 C16orf86Q6ZW13 317 aa19.17■□□□□ 0.66
PHF1-202ENST00000374516 RASGRP2Q7LDG7 609 aa19.17■□□□□ 0.66
PHF1-202ENST00000374516 KRI1Q8N9T8 703 aaKnown RBP19.17■□□□□ 0.66
PHF1-202ENST00000374516 NRXN2Q9P2S2 1712 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 GOLGA6L9A6NEM1 432 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 H0YIN7 160 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 CUTAO60888 179 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 SCG2P13521 617 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 CAPN2P17655 700 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 LONRF3Q496Y0 759 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 RESP18Q5W5W9 173 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 METTL16Q86W50 562 aaKnown RBP19.16■□□□□ 0.66
PHF1-202ENST00000374516 TMEM47Q9BQJ4 181 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 PCDHA5Q9Y5H7 936 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 NAV1Q8NEY1 1877 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 ADAMTS3O15072 1205 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 STX10O60499 249 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 SMC1AQ14683 1233 aaKnown RBP19.16■□□□□ 0.66
PHF1-202ENST00000374516 NPY5RQ15761 445 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 RSRC2Q7L4I2 434 aaKnown RBP19.16■□□□□ 0.66
PHF1-202ENST00000374516 ZNF287Q9HBT7 754 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 MRFAP1Q9Y605 127 aa19.16■□□□□ 0.66
PHF1-202ENST00000374516 COL11A2P13942 1736 aaPredicted RBP19.15■□□□□ 0.66
PHF1-202ENST00000374516 WNT7AO00755 349 aa19.15■□□□□ 0.66
PHF1-202ENST00000374516 GOLGA8HP0CJ92 632 aa19.15■□□□□ 0.66
PHF1-202ENST00000374516 CDK11BP21127 795 aaKnown RBP19.15■□□□□ 0.66
PHF1-202ENST00000374516 SLC15A2Q16348 729 aa19.15■□□□□ 0.66
PHF1-202ENST00000374516 ANKS1AQ92625 1134 aa19.15■□□□□ 0.66
PHF1-202ENST00000374516 DDX4Q9NQI0 724 aaKnown RBP19.15■□□□□ 0.66
PHF1-202ENST00000374516 MAD2L2Q9UI95 211 aa19.15■□□□□ 0.66
PHF1-202ENST00000374516 BMP6P22004 513 aa19.14■□□□□ 0.66
PHF1-202ENST00000374516 OAS2P29728 719 aaKnown RBP19.14■□□□□ 0.66
PHF1-202ENST00000374516 NLRP5P59047 1200 aa19.14■□□□□ 0.66
PHF1-202ENST00000374516 PPP2R3AQ06190 1150 aa19.14■□□□□ 0.66
PHF1-202ENST00000374516 PFKFB3Q16875 520 aaPredicted RBP19.14■□□□□ 0.66
PHF1-202ENST00000374516 TXLNBQ8N3L3 684 aa19.14■□□□□ 0.66
PHF1-202ENST00000374516 NEK11Q8NG66 645 aa19.14■□□□□ 0.66
PHF1-202ENST00000374516 GPKOWQ92917 476 aaPredicted RBP eCLIP19.14■□□□□ 0.665e-9■■■■□ 21.7
PHF1-202ENST00000374516 PARD6BQ9BYG5 372 aa19.14■□□□□ 0.66
PHF1-202ENST00000374516 ARFGAP3Q9NP61 516 aa19.14■□□□□ 0.66
PHF1-202ENST00000374516 TCP11L1Q9NUJ3 509 aa19.14■□□□□ 0.66
PHF1-202ENST00000374516 FBXO2Q9UK22 296 aaPredicted RBP19.14■□□□□ 0.66
PHF1-202ENST00000374516 KCNH3Q9ULD8 1083 aa19.14■□□□□ 0.66
PHF1-202ENST00000374516 KRBA2Q6ZNG9 492 aa19.14■□□□□ 0.65
PHF1-202ENST00000374516 PDILTQ8N807 584 aa19.14■□□□□ 0.65
PHF1-202ENST00000374516 CNNM3Q8NE01 707 aa19.14■□□□□ 0.65
PHF1-202ENST00000374516 SMARCE1Q969G3 411 aa19.14■□□□□ 0.65
PHF1-202ENST00000374516 PDGFDQ9GZP0 370 aaPredicted RBP19.14■□□□□ 0.65
PHF1-202ENST00000374516 CPVLQ9H3G5 476 aa19.14■□□□□ 0.65
PHF1-202ENST00000374516 USP40Q9NVE5 1235 aa19.14■□□□□ 0.65
PHF1-202ENST00000374516 CDK5RAP2Q96SN8 1893 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 TOGARAM2Q6ZUX3 1019 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 TC2NQ8N9U0 490 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 PTPREP23469 700 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 SLC20A2Q08357 652 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 GRM4Q14833 912 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 SLC35G1Q2M3R5 365 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 RABGGTAQ92696 567 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 KIFC2Q96AC6 838 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 CEP95Q96GE4 821 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 BRMS1Q9HCU9 246 aa19.13■□□□□ 0.65
PHF1-202ENST00000374516 TRIM75PA6NK02 468 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 CYTH3O43739 400 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 ADKP55263 362 aaKnown RBP19.12■□□□□ 0.65
PHF1-202ENST00000374516 MDM2Q00987 491 aaPredicted RBP19.12■□□□□ 0.65
PHF1-202ENST00000374516 HSP90AA4PQ58FG1 418 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 CCDC178Q5BJE1 867 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 NEDD1Q8NHV4 660 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 CCDC34Q96HJ3 373 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 FUT8Q9BYC5 575 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 SUGT1Q9Y2Z0 365 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 PCDHAC2Q9Y5I4 1007 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 SNED1Q8TER0 1413 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 GPS2Q13227 327 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 ZNF174Q15697 407 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 SPECC1LQ69YQ0 1117 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 USP49Q70CQ1 688 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 KIAA0825Q8IV33 1275 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 TNFRSF25Q93038 417 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 TRERF1Q96PN7 1200 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 CAMKK2Q96RR4 588 aa19.12■□□□□ 0.65
PHF1-202ENST00000374516 NT5C2P49902 561 aa19.11■□□□□ 0.65
PHF1-202ENST00000374516 PIK3AP1Q6ZUJ8 805 aa19.11■□□□□ 0.65
PHF1-202ENST00000374516 CEP131Q9UPN4 1083 aa19.11■□□□□ 0.65
PHF1-202ENST00000374516 FOXN1O15353 648 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms