RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 CCL14Q16627 93 aa23.59■■□□□ 1.37
TMEM53-205ENST00000372244 MAP3K21Q5TCX8 1036 aa23.59■■□□□ 1.37
TMEM53-205ENST00000372244 KRT23Q9C075 422 aa23.59■■□□□ 1.37
TMEM53-205ENST00000372244 CNNM2Q9H8M5 875 aa23.59■■□□□ 1.37
TMEM53-205ENST00000372244 U3KPZ7 1027 aaPredicted RBP23.59■■□□□ 1.37
TMEM53-205ENST00000372244 B4E1Z4 1266 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 ZBED4O75132 1171 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 CYP21A2P08686 494 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 FDX1P10109 184 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 ADORA2AP29274 412 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 STAT2P52630 851 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 CCDC178Q5BJE1 867 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 ERICH6BQ5W0A0 696 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 FAM160B2Q86V87 743 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 DCAF4Q8WV16 495 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 TEX13BQ9BXU2 312 aa23.58■■□□□ 1.37
TMEM53-205ENST00000372244 RPTORQ8N122 1335 aa23.57■■□□□ 1.36
TMEM53-205ENST00000372244 CENPBP07199 599 aaPredicted RBP23.57■■□□□ 1.36
TMEM53-205ENST00000372244 COPB2P35606 906 aa23.57■■□□□ 1.36
TMEM53-205ENST00000372244 KCTD1Q719H9 257 aa23.57■■□□□ 1.36
TMEM53-205ENST00000372244 IQCA1Q86XH1 822 aa23.57■■□□□ 1.36
TMEM53-205ENST00000372244 NPLOC4Q8TAT6 608 aa23.57■■□□□ 1.36
TMEM53-205ENST00000372244 FLRT1Q9NZU1 646 aa23.57■■□□□ 1.36
TMEM53-205ENST00000372244 RBBP6Q7Z6E9 1792 aaKnown RBP23.57■■□□□ 1.36
TMEM53-205ENST00000372244 COBLO75128 1261 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 SGPL1O95470 568 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 FCER1AP12319 257 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 ZKSCAN1P17029 563 aaPredicted RBP23.56■■□□□ 1.36
TMEM53-205ENST00000372244 OAZ1P54368 228 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 RASGRP2Q7LDG7 609 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 CHMP4CQ96CF2 233 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 ZSCAN10Q96SZ4 725 aaPredicted RBP23.56■■□□□ 1.36
TMEM53-205ENST00000372244 ZKSCAN3Q9BRR0 538 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 ESYT1Q9BSJ8 1104 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 RIPK3Q9Y572 518 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 SNHG28P0DPA3 235 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 CACNB2Q08289 660 aaPredicted RBP23.56■■□□□ 1.36
TMEM53-205ENST00000372244 BTNL9Q6UXG8 535 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 DPP9Q86TI2 863 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 U2AF1L4Q8WU68 220 aaKnown RBP23.56■■□□□ 1.36
TMEM53-205ENST00000372244 SHISA4Q96DD7 197 aa23.56■■□□□ 1.36
TMEM53-205ENST00000372244 PDE4DIPQ5VU43 2346 aa23.55■■□□□ 1.36
TMEM53-205ENST00000372244 TNRC18O15417 2968 aaPredicted RBP23.55■■□□□ 1.36
TMEM53-205ENST00000372244 PDHBP11177 359 aa23.55■■□□□ 1.36
TMEM53-205ENST00000372244 CAPN2P17655 700 aa23.55■■□□□ 1.36
TMEM53-205ENST00000372244 SNRNP48Q6IEG0 339 aaKnown RBP23.55■■□□□ 1.36
TMEM53-205ENST00000372244 LSG1Q9H089 658 aaKnown RBP23.55■■□□□ 1.36
TMEM53-205ENST00000372244 RAVER2Q9HCJ3 691 aaKnown RBP23.55■■□□□ 1.36
TMEM53-205ENST00000372244 HMX1Q9NP08 348 aaPredicted RBP23.55■■□□□ 1.36
TMEM53-205ENST00000372244 LAMA4Q16363 1823 aa23.55■■□□□ 1.36
TMEM53-205ENST00000372244 PRKAR2AP13861 404 aaKnown RBP23.54■■□□□ 1.36
TMEM53-205ENST00000372244 KIAA1211Q6ZU35 1233 aa23.54■■□□□ 1.36
TMEM53-205ENST00000372244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.54■■□□□ 1.36
TMEM53-205ENST00000372244 CPXCR1Q8N123 301 aa23.54■■□□□ 1.36
TMEM53-205ENST00000372244 ENAHQ8N8S7 591 aaPredicted RBP23.54■■□□□ 1.36
TMEM53-205ENST00000372244 DEFB118Q96PH6 123 aa23.54■■□□□ 1.36
TMEM53-205ENST00000372244 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.54■■□□□ 1.36
TMEM53-205ENST00000372244 PRR12Q9ULL5 1215 aa23.54■■□□□ 1.36
TMEM53-205ENST00000372244 TAF6LQ9Y6J9 622 aa23.54■■□□□ 1.36
TMEM53-205ENST00000372244 COL11A1P12107 1806 aaPredicted RBP23.53■■□□□ 1.36
TMEM53-205ENST00000372244 ZNF536O15090 1300 aa23.53■■□□□ 1.36
TMEM53-205ENST00000372244 OLFML2BQ68BL8 750 aa23.53■■□□□ 1.36
TMEM53-205ENST00000372244 TTBK2Q6IQ55 1244 aa23.53■■□□□ 1.36
TMEM53-205ENST00000372244 MMP19Q99542 508 aa23.53■■□□□ 1.36
TMEM53-205ENST00000372244 CRISPLD2Q9H0B8 497 aa23.53■■□□□ 1.36
TMEM53-205ENST00000372244 SLC5A4Q9NY91 659 aa23.53■■□□□ 1.36
TMEM53-205ENST00000372244 MTMR7Q9Y216 660 aa23.53■■□□□ 1.36
TMEM53-205ENST00000372244 CTDP1Q9Y5B0 961 aaPredicted RBP23.53■■□□□ 1.36
TMEM53-205ENST00000372244 RBM8AQ9Y5S9 174 aaKnown RBP23.53■■□□□ 1.36
TMEM53-205ENST00000372244 IKQ13123 557 aaPredicted RBP23.52■■□□□ 1.36
TMEM53-205ENST00000372244 MFSD14CQ5VZR4 134 aa23.52■■□□□ 1.36
TMEM53-205ENST00000372244 UBE2Q1Q7Z7E8 422 aa23.52■■□□□ 1.36
TMEM53-205ENST00000372244 PPP4R2Q9NY27 417 aa23.52■■□□□ 1.36
TMEM53-205ENST00000372244 ISY1Q9ULR0 285 aaKnown RBP23.52■■□□□ 1.36
TMEM53-205ENST00000372244 E7EWF7 191 aa23.51■■□□□ 1.35
TMEM53-205ENST00000372244 ZNF543Q08ER8 600 aa23.51■■□□□ 1.35
TMEM53-205ENST00000372244 TRDNQ13061 729 aa23.51■■□□□ 1.35
TMEM53-205ENST00000372244 KCTD2Q14681 263 aa23.51■■□□□ 1.35
TMEM53-205ENST00000372244 CCDC96Q2M329 555 aa23.51■■□□□ 1.35
TMEM53-205ENST00000372244 CYB5R4Q7L1T6 521 aa23.51■■□□□ 1.35
TMEM53-205ENST00000372244 DIS3Q9Y2L1 958 aaKnown RBP23.51■■□□□ 1.35
TMEM53-205ENST00000372244 TNKSO95271 1327 aa23.51■■□□□ 1.35
TMEM53-205ENST00000372244 SEC23AQ15436 765 aa23.5■■□□□ 1.35
TMEM53-205ENST00000372244 ZNF792Q3KQV3 632 aa23.5■■□□□ 1.35
TMEM53-205ENST00000372244 STOX1Q6ZVD7 989 aa23.5■■□□□ 1.35
TMEM53-205ENST00000372244 PNMA1Q8ND90 353 aa23.5■■□□□ 1.35
TMEM53-205ENST00000372244 CHST13Q8NET6 341 aa23.5■■□□□ 1.35
TMEM53-205ENST00000372244 ZNF236Q9UL36 1845 aa23.5■■□□□ 1.35
TMEM53-205ENST00000372244 TFRCP02786 760 aaKnown RBP23.49■■□□□ 1.35
TMEM53-205ENST00000372244 PGK2P07205 417 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 CYP2C19P33261 490 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 SLC16A2P36021 539 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 MAML3Q96JK9 1138 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 AGBL1Q96MI9 1066 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 UBAC1Q9BSL1 405 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 GPCPD1Q9NPB8 672 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 FBXO40Q9UH90 709 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 FRMPD2Q68DX3 1309 aaPredicted RBP23.49■■□□□ 1.35
TMEM53-205ENST00000372244 DNAJC25-GNG10A0A024R161 153 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 NECTIN1Q15223 517 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms