RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 TACC3Q9Y6A5 838 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 C5P01031 1676 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 NDUFAB1O14561 156 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 ATP5JP18859 108 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 GUCY1A2P33402 732 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 PTGISQ16647 500 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 YTHDF3Q7Z739 585 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 STAMBPL1Q96FJ0 436 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 CCT8L2Q96SF2 557 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 TARSL2A2RTX5 802 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 H7C1W4 665 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 KCNB1Q14721 858 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 TRIM22Q8IYM9 498 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 NUP88Q99567 741 aaPredicted RBP9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 VPS16Q9H269 839 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 BLZF1Q9H2G9 400 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 FBXO2Q9UK22 296 aaPredicted RBP9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 FLT4P35916 1363 aa9.78□□□□□ -0.84
SMARCA1-203ENST00000371123 MAST3O60307 1309 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 ZEB2O60315 1214 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 IPO7O95373 1038 aaKnown RBP9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 ABL2P42684 1182 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 PIP4K2BP78356 416 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 POSTNQ15063 836 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 ZNF174Q15697 407 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 TBC1D25Q3MII6 688 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 C1orf167Q5SNV9 1468 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 PARP9Q8IXQ6 854 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 OTUD6BQ8N6M0 293 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 EPN3Q9H201 632 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 ARMT1Q9H993 441 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 CABP5Q9NP86 173 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 AXIN2Q9Y2T1 843 aa9.77□□□□□ -0.84
SMARCA1-203ENST00000371123 MYH1P12882 1939 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 CAMTA1Q9Y6Y1 1673 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 SLIT3O75094 1523 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 POLR2DO15514 142 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 PPP6R2O75170 966 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 GCKRQ14397 625 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 PDIA6Q15084 440 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 IRF2BP1Q8IU81 584 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 IQCKQ8N0W5 287 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 ZBTB10Q96DT7 871 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 SALL4Q9UJQ4 1053 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 RPS6KL1Q9Y6S9 549 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 USP6P35125 1406 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 ZNF335Q9H4Z2 1342 aaPredicted RBP9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 MYBL1P10243 752 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 HAUS3Q68CZ6 603 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 CEP57Q86XR8 500 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 MB21D2Q8IYB1 491 aaPredicted RBP9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 CCDC148Q8NFR7 591 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 LMBR1Q8WVP7 490 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 MTRQ99707 1265 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 CWC25Q9NXE8 425 aaPredicted RBP9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 CNOT8Q9UFF9 292 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 L3MBTL1Q9Y468 752 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 PARP4Q9UKK3 1724 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 TMEM94Q12767 1356 aa9.77□□□□□ -0.85
SMARCA1-203ENST00000371123 A0A1B0GVG6 124 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 DCDC2CA8MYV0 355 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 KLK7P49862 253 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 PTPN12Q05209 780 aaKnown RBP9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 THEMIS2Q5TEJ8 643 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 EMC10Q5UCC4 262 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 FBXL16Q8N461 479 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 MAB21L3Q8N8X9 362 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 HAUS7Q99871 368 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 KCNMB3Q9NPA1 279 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 PHLPP1O60346 1717 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 PKD1L3Q7Z443 1732 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 SH3TC1Q8TE82 1336 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 MGRN1O60291 552 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 SNRPA1P09661 255 aaKnown RBP9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 NTRK3Q16288 839 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 ANKRD20A8PQ5CZ79 823 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 MAGEB6Q8N7X4 407 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 OSBP2Q969R2 916 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 ENO4A6NNW6 628 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 G3V3G9 751 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 IDEP14735 1019 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 PLCD1P51178 756 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 KRT31Q15323 416 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 CEP85LQ5SZL2 805 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 DCAF8Q5TAQ9 597 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 NLRP14Q86W24 1093 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 FAM184BQ9ULE4 1060 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 STX8Q9UNK0 236 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 LEMD3Q9Y2U8 911 aa9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 GOLGB1Q14789 3259 aaKnown RBP9.76□□□□□ -0.85
SMARCA1-203ENST00000371123 ESYT3A0FGR9 886 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 NDUFA10O95299 355 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 GLI1P08151 1106 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 LINGO3P0C6S8 592 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 ADCY2Q08462 1091 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms