RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 USP17L2Q6R6M4 530 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 FOXP1Q9H334 677 aaPredicted RBP13.9□□□□□ -0.18
USF1-203ENST00000368021 SH3GLB2Q9NR46 395 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 KIF28PB7ZC32 967 aa13.89□□□□□ -0.19
USF1-203ENST00000368021 MYSM1Q5VVJ2 828 aa13.89□□□□□ -0.19
USF1-203ENST00000368021 TAF3Q5VWG9 929 aa13.89□□□□□ -0.19
USF1-203ENST00000368021 SIAH1Q8IUQ4 282 aa13.89□□□□□ -0.19
USF1-203ENST00000368021 GMCL1P1Q8NEA9 526 aa13.89□□□□□ -0.19
USF1-203ENST00000368021 CLMNQ96JQ2 1002 aa13.89□□□□□ -0.19
USF1-203ENST00000368021 ZIC5Q96T25 663 aa13.89□□□□□ -0.19
USF1-203ENST00000368021 PHF20Q9BVI0 1012 aa13.89□□□□□ -0.19
USF1-203ENST00000368021 RIOX1Q9H6W3 641 aa13.89□□□□□ -0.19
USF1-203ENST00000368021 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 CAP2P40123 477 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 IREB2P48200 963 aaKnown RBP13.88□□□□□ -0.19
USF1-203ENST00000368021 UBE2HP62256 183 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 ATP2B2Q01814 1243 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 ZNF543Q08ER8 600 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 GNL2Q13823 731 aaKnown RBP13.88□□□□□ -0.19
USF1-203ENST00000368021 SHROOM1Q2M3G4 852 aaPredicted RBP13.88□□□□□ -0.19
USF1-203ENST00000368021 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 DIS3L2Q8IYB7 885 aaKnown RBP13.88□□□□□ -0.19
USF1-203ENST00000368021 DCAF4Q8WV16 495 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 HOOK2Q96ED9 719 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 GINM1Q9NU53 330 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 ZBTB21Q9ULJ3 1066 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 MTMR7Q9Y216 660 aa13.88□□□□□ -0.19
USF1-203ENST00000368021 hCG_1642624A0A1W2PR95 340 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 ECE1P42892 770 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 JAG1P78504 1218 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 RASGRP2Q7LDG7 609 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 NOSTRINQ8IVI9 506 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 LEO1Q8WVC0 666 aaPredicted RBP13.87□□□□□ -0.19
USF1-203ENST00000368021 ZKSCAN4Q969J2 545 aaPredicted RBP13.87□□□□□ -0.19
USF1-203ENST00000368021 SPATA32Q96LK8 384 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 VPS54Q9P1Q0 977 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 KCNJ14Q9UNX9 436 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 GOLGA6L3A6NEY3 463 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 PHF20L1A8MW92 1017 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 ASNSP08243 561 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 LDLRAD1Q5T700 205 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 GPT2Q8TD30 523 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 SHISA4Q96DD7 197 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 SLC10A4Q96EP9 437 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 RRP36Q96EU6 259 aaKnown RBP13.87□□□□□ -0.19
USF1-203ENST00000368021 GMCL1Q96IK5 515 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 HHIPL1Q96JK4 782 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 USP28Q96RU2 1077 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 WRNIP1Q96S55 665 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 ARHGEF10LQ9HCE6 1279 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 BRMS1Q9HCU9 246 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 POLR3EQ9NVU0 708 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 RTEL1Q9NZ71 1219 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 TFIP11Q9UBB9 837 aaKnown RBP13.87□□□□□ -0.19
USF1-203ENST00000368021 RCOR1Q9UKL0 485 aa13.87□□□□□ -0.19
USF1-203ENST00000368021 FAM155AB1AL88 458 aaPredicted RBP13.86□□□□□ -0.19
USF1-203ENST00000368021 BTBD18B2RXH4 712 aa13.86□□□□□ -0.19
USF1-203ENST00000368021 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
USF1-203ENST00000368021 CALML3P27482 149 aa13.86□□□□□ -0.19
USF1-203ENST00000368021 MRE11P49959 708 aa13.86□□□□□ -0.19
USF1-203ENST00000368021 DCAF15Q66K64 600 aa13.86□□□□□ -0.19
USF1-203ENST00000368021 ZNF713Q8N859 430 aaPredicted RBP13.86□□□□□ -0.19
USF1-203ENST00000368021 BARHL2Q9NY43 387 aa13.86□□□□□ -0.19
USF1-203ENST00000368021 PAPPA2Q9BXP8 1791 aa13.86□□□□□ -0.19
USF1-203ENST00000368021 GADD45BO75293 160 aaPredicted RBP13.85□□□□□ -0.19
USF1-203ENST00000368021 KRT2P35908 639 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 SLC1A4P43007 532 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 NASPP49321 788 aaPredicted RBP13.85□□□□□ -0.19
USF1-203ENST00000368021 NPY5RQ15761 445 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 MAP3K11Q16584 847 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 SLFN13Q68D06 897 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 GALNT17Q6IS24 598 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.85□□□□□ -0.19
USF1-203ENST00000368021 ANKRD13AQ8IZ07 590 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 CCDC148Q8NFR7 591 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 CCDC102AQ96A19 550 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 ELP3Q9H9T3 547 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 SEC63Q9UGP8 760 aaKnown RBP13.85□□□□□ -0.19
USF1-203ENST00000368021 TMX2Q9Y320 296 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
USF1-203ENST00000368021 A0A0U1RQG5 324 aaPredicted RBP13.85□□□□□ -0.19
USF1-203ENST00000368021 F5H6K3 240 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 YEATS4O95619 227 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 INPP5BP32019 993 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 MAP3K9P80192 1104 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 KLRC3Q07444 240 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 VGLL4Q14135 290 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 WWC2Q6AWC2 1192 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 RASAL3Q86YV0 1011 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.85□□□□□ -0.197e-6■□□□□ 9.2
USF1-203ENST00000368021 CCDC12Q8WUD4 166 aaPredicted RBP13.85□□□□□ -0.19
USF1-203ENST00000368021 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 ZNF341Q9BYN7 854 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 SH2D4AQ9H788 454 aa13.85□□□□□ -0.19
USF1-203ENST00000368021 A0A1W2PRG0 241 aa13.84□□□□□ -0.19
USF1-203ENST00000368021 CTNND1O60716 968 aaKnown RBP13.84□□□□□ -0.19
USF1-203ENST00000368021 CCDC96Q2M329 555 aa13.84□□□□□ -0.19
USF1-203ENST00000368021 RILPL1Q5EBL4 403 aa13.84□□□□□ -0.19
USF1-203ENST00000368021 MTMR8Q96EF0 704 aa13.84□□□□□ -0.19
USF1-203ENST00000368021 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms