RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 APOA5Q6Q788 366 aa7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 ZNF654Q8IZM8 581 aa7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 ANKS1AQ92625 1134 aa7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 GTF3C6Q969F1 213 aa7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 LARP6Q9BRS8 491 aaKnown RBP7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 SH2D4AQ9H788 454 aa7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 ARHGEF10LQ9HCE6 1279 aa7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 GPHNQ9NQX3 736 aaPredicted RBP7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 PICK1Q9NRD5 415 aa7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 SYNPO2Q9UMS6 1093 aa7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.9□□□□□ -1.14
RNU1-55P-201ENST00000365510 CPLX1O14810 134 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 CDKL5O76039 1030 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 LARGE1O95461 756 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 HOXD10P28358 340 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 PDIA3P30101 505 aaKnown RBP7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 NOVP48745 357 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 MNX1P50219 401 aaPredicted RBP7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 FCGRTP55899 365 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 SPP2Q13103 211 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 STK3Q13188 491 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 SEPT2Q15019 361 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 RTN1Q16799 776 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 NOL9Q5SY16 702 aaKnown RBP7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 RCSD1Q6JBY9 416 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 CLEC10AQ8IUN9 316 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 CCDC83Q8IWF9 413 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 C7orf61Q8IZ16 206 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 SCYL3Q8IZE3 742 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 LRRC47Q8N1G4 583 aaKnown RBP7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 PNMA1Q8ND90 353 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 CTCFLQ8NI51 663 aaPredicted RBP7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 NUP133Q8WUM0 1156 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 INTS4Q96HW7 963 aaKnown RBP7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 TMEM47Q9BQJ4 181 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 SENP2Q9HC62 589 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 RBM28Q9NW13 759 aaKnown RBP7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 BRPF3Q9ULD4 1205 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 ALPK3Q96L96 1907 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 MGAMO43451 1857 aa7.89□□□□□ -1.15
RNU1-55P-201ENST00000365510 RANBP2P49792 3224 aaKnown RBP7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 DOCK1Q14185 1865 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 A0A0G2JLL6 359 aaPredicted RBP7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 CXCL11O14625 94 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 TNPO2O14787 897 aaKnown RBP7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 EVI5O60447 810 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 EEF2P13639 858 aaKnown RBP7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 RXRAP19793 462 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 CYP2B6P20813 491 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 KIF5BP33176 963 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 PRMT2P55345 433 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 UBXN2AP68543 259 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 CCT2P78371 535 aaKnown RBP7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 SCRN1Q12765 414 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 CUL4AQ13619 759 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 PPP2R5BQ15173 497 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 Q3C1V9 767 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 POTEEQ6S8J3 1075 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 PRRT2Q7Z6L0 340 aaPredicted RBP7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 RAB11FIP4Q86YS3 637 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 CCDC144CPQ8IYA2 1237 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 NECAB1Q8N987 351 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 MAP3K14Q99558 947 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 FEZ1Q99689 392 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 LLPHQ9BRT6 129 aaKnown RBP7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 MYL10Q9BUA6 226 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 AS3MTQ9HBK9 375 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 GOPCQ9HD26 462 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 NYAP2Q9P242 653 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 CLIP2Q9UDT6 1046 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 GJD2Q9UKL4 321 aa7.88□□□□□ -1.15
RNU1-55P-201ENST00000365510 USP17L5A8MUK1 530 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 RAD21O60216 631 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 GNRH1P01148 92 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 PARP1P09874 1014 aaKnown RBP7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 GUCY1A2P33402 732 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 SLC4A3P48751 1232 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 GNAQP50148 359 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 HMGCS2P54868 508 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 HMGN5P82970 282 aaKnown RBP7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 TROAPQ12815 778 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 GRM4Q14833 912 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 CCDC96Q2M329 555 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 ASPRV1Q53RT3 343 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 FANCBQ8NB91 859 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 GMCL1P1Q8NEA9 526 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 MKL1Q969V6 931 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 PARK7Q99497 189 aaKnown RBP7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 P2RX7Q99572 595 aaKnown RBP7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 NCOA5Q9HCD5 579 aaKnown RBP7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 ZCCHC17Q9NP64 241 aaKnown RBP7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 ISY1Q9ULR0 285 aaKnown RBP7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 SMC3Q9UQE7 1217 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 MTMR7Q9Y216 660 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 KIF3AQ9Y496 699 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 ATAD5Q96QE3 1844 aa7.87□□□□□ -1.15
RNU1-55P-201ENST00000365510 PTPDC1A2A3K4 754 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 PDHBP11177 359 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 SLC1A4P43007 532 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms