RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 LGR4Q9BXB1 951 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 MRPL4Q9BYD3 311 aaKnown RBP5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 NCOA5Q9HCD5 579 aaKnown RBP5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 PCDH12Q9NPG4 1184 aa5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 PRDM5Q9NQX1 630 aaPredicted RBP5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 CGGBP1Q9UFW8 167 aaPredicted RBP5.36□□□□□ -1.55
RNU6-28P-201ENST00000362378 hCG_2014768A0A024R1R8 64 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 IGF2BP3O00425 579 aaKnown RBP eCLIP5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 PRODHO43272 600 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 SIGLEC6O43699 453 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 FAM87AP0C7U9 286 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 GRIA2P42262 883 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 CHRNA4P43681 627 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 PABPC4Q13310 644 aaKnown RBP eCLIP5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 SNW1Q13573 536 aaKnown RBP5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 CBX2Q14781 532 aaPredicted RBP5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 NSMFQ6X4W1 530 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 KRT26Q7Z3Y9 468 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 NIM1KQ8IY84 436 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 DTWD2Q8NBA8 298 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 ADCY4Q8NFM4 1077 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 BRF1Q92994 677 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 MFSD3Q96ES6 412 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 CCDC140Q96MF4 163 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 KCNH3Q9ULD8 1083 aa5.35□□□□□ -1.55
RNU6-28P-201ENST00000362378 KCNQ2O43526 872 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 ZNF865P0CJ78 1059 aaPredicted RBP5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 TRIM61Q5EBN2 209 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 GTF2IRD2BQ6EKJ0 949 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 ZAR1Q86SH2 424 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 GTF2IRD2Q86UP8 949 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 CD163Q86VB7 1156 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 FIBCD1Q8N539 461 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 PIWIL2Q8TC59 973 aaKnown RBP5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 ENOX1Q8TC92 643 aaKnown RBP5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 HEXIM2Q96MH2 286 aaKnown RBP5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 IER2Q9BTL4 223 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 NOL6Q9H6R4 1146 aaKnown RBP5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 GFOD1Q9NXC2 390 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 GTF2IRD1Q9UHL9 959 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 RAXQ9Y2V3 346 aa5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 SF3B6Q9Y3B4 125 aaKnown RBP5.34□□□□□ -1.55
RNU6-28P-201ENST00000362378 C1QTNF9BB2RNN3 333 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 RBAK-RBAKDNI3L0D1 243 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 DLX3O60479 287 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 KCNH1O95259 989 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 SCG5P05408 212 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 C6orf222P0C671 652 aaPredicted RBP5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 HOXC12P31275 282 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 ADMP35318 185 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 GFRA1P56159 465 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 ANAPC15P60006 121 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 AMPD3Q01432 767 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 MAP4K2Q12851 820 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 NMIQ13287 307 aaPredicted RBP5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 C21orf62-AS1Q17RA5 79 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 TMC3Q7Z5M5 1100 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 DHX37Q8IY37 1157 aaKnown RBP5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 BTN2A2Q8WVV5 523 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 DCAF5Q96JK2 942 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 CLUHP3Q96NS8 147 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 NKX2-4Q9H2Z4 354 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 C7orf69Q9H7B7 122 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 CHST7Q9NS84 486 aa5.33□□□□□ -1.56
RNU6-28P-201ENST00000362378 A0A087X0B3 334 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 HMX2A2RU54 273 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 RAPGEF3O95398 923 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 PRAMEF1O95521 474 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 CBX7O95931 251 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 SRFP11831 508 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 CYP27A1Q02318 531 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 PPP2R5DQ14738 602 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 CYP27C1Q4G0S4 372 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 THNSL2Q86YJ6 484 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 DAGLBQ8NCG7 672 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 TBC1D32Q96NH3 1257 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 GPR62Q9BZJ7 368 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 CYP26B1Q9NR63 512 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 INTS7Q9NVH2 962 aaKnown RBP5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 STOML1Q9UBI4 398 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 CAPN6Q9Y6Q1 641 aa5.32□□□□□ -1.56
RNU6-28P-201ENST00000362378 PRR33A8MZF0 331 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 CPP00450 1065 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 GSNP06396 782 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 ITIH2P19823 946 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 CDK11BP21127 795 aaKnown RBP5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 STAT3P40763 770 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 GABREP78334 506 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 AMPD2Q01433 879 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 TNK2Q07912 1038 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 CYP4F3Q08477 520 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 SF1Q15637 639 aaKnown RBP5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 SLC35F1Q5T1Q4 408 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 PRR23CQ6ZRP0 262 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 Q8N3U1 123 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 MFSD4AQ8N468 514 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 GSTCDQ8NEC7 633 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 KCTD13Q8WZ19 329 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 C1orf159Q96HA4 380 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms