RNA–Protein interactions for RNA: ENST00000361690.7

SRPK1-202, Transcript of SRSF protein kinase 1, humanhuman

TSL 1 (best)

Gene SRPK1, Length 4,286 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-202ENST00000361690 FOCADQ5VW36 1801 aa11.49□□□□□ -0.57
SRPK1-202ENST00000361690 SNHG28P0DPA3 235 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 UVSSAQ2YD98 709 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 KRT25Q7Z3Z0 450 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 CNOT7Q9UIV1 285 aaKnown RBP11.48□□□□□ -0.57
SRPK1-202ENST00000361690 KCNH3Q9ULD8 1083 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 KIF13BQ9NQT8 1826 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 NPY5RQ15761 445 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 SHROOM1Q2M3G4 852 aaPredicted RBP11.48□□□□□ -0.57
SRPK1-202ENST00000361690 TBC1D10BQ4KMP7 808 aaPredicted RBP11.48□□□□□ -0.57
SRPK1-202ENST00000361690 SPECC1Q5M775 1068 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 MKL1Q969V6 931 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 SRPRBQ9Y5M8 271 aaKnown RBP11.48□□□□□ -0.57
SRPK1-202ENST00000361690 COL4A5P29400 1685 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 PNMA6FA0A0J9YX94 578 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 F5H6K3 240 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 KLRC3Q07444 240 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 RESP18Q5W5W9 173 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 TYW1BQ6NUM6 668 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 SHC4Q6S5L8 630 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 METTL16Q86W50 562 aaKnown RBP11.48□□□□□ -0.57
SRPK1-202ENST00000361690 ADGRF4Q8IZF3 695 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 CNNM3Q8NE01 707 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 FERMT2Q96AC1 680 aa11.48□□□□□ -0.57
SRPK1-202ENST00000361690 RASA3Q14644 834 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 ANO6Q4KMQ2 910 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 NOM1Q5C9Z4 860 aaKnown RBP11.47□□□□□ -0.57
SRPK1-202ENST00000361690 REXO1Q8N1G1 1221 aaKnown RBP11.47□□□□□ -0.57
SRPK1-202ENST00000361690 DAGLBQ8NCG7 672 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 DPF2Q92785 391 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 COA7Q96BR5 231 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 COL2A1P02458 1487 aaPredicted RBP11.47□□□□□ -0.57
SRPK1-202ENST00000361690 MYH15Q9Y2K3 1946 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 SHTN1A0MZ66 631 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 ADCY7P51828 1080 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 PTGDRQ13258 359 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 NONOQ15233 471 aaKnown RBP eCLIP11.47□□□□□ -0.57
SRPK1-202ENST00000361690 STX1AQ16623 288 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 FAM200AQ8TCP9 573 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 ZMYND12Q9H0C1 365 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 ANO10Q9NW15 660 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 FBXO2Q9UK22 296 aaPredicted RBP11.47□□□□□ -0.57
SRPK1-202ENST00000361690 INF2Q27J81 1249 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 JMJD4Q9H9V9 463 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 MYH8P13535 1937 aa11.47□□□□□ -0.57
SRPK1-202ENST00000361690 JAKMIP3Q5VZ66 844 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 RBM43Q6ZSC3 357 aaKnown RBP11.46□□□□□ -0.57
SRPK1-202ENST00000361690 SAMD7Q7Z3H4 446 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 FUCA2Q9BTY2 467 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 SH2D4AQ9H788 454 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 PCDHA6Q9UN73 950 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 PCDHA8Q9Y5H6 950 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 ECM29Q5VYK3 1845 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 USP17L10C9JJH3 530 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 CAVIN2O95810 425 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 NDUFB10O96000 172 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 BMP3P12645 472 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 ZNF280AP59817 542 aaPredicted RBP11.46□□□□□ -0.57
SRPK1-202ENST00000361690 PDILTQ8N807 584 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 ZNF579Q8NAF0 562 aaKnown RBP11.46□□□□□ -0.57
SRPK1-202ENST00000361690 ZBTB21Q9ULJ3 1066 aa11.46□□□□□ -0.57
SRPK1-202ENST00000361690 VWA3AA6NCI4 1184 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 ZBTB5O15062 677 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 MRPL12P52815 198 aaKnown RBP11.46□□□□□ -0.58
SRPK1-202ENST00000361690 KIF4BQ2VIQ3 1234 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 TIGD1Q96MW7 591 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 FEZ1Q99689 392 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 CSRNP2Q9H175 543 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 GOPCQ9HD26 462 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 BIN2Q9UBW5 565 aaPredicted RBP11.46□□□□□ -0.58
SRPK1-202ENST00000361690 MRVI1Q9Y6F6 885 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 BECN2A8MW95 431 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 GOLGA6L19H0YKK7 550 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 FZD9O00144 591 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 TXLNAP40222 546 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 ZNF165P49910 485 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.58
SRPK1-202ENST00000361690 RASSF8Q8NHQ8 419 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 NAT10Q9H0A0 1025 aaKnown RBP11.46□□□□□ -0.58
SRPK1-202ENST00000361690 DNAJC25Q9H1X3 360 aa11.46□□□□□ -0.58
SRPK1-202ENST00000361690 SCAF8Q9UPN6 1271 aaKnown RBP11.46□□□□□ -0.58
SRPK1-202ENST00000361690 CNTNAP1P78357 1384 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 ESYT2A0FGR8 921 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 TMEM232C9JQI7 657 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 SPICE1Q8N0Z3 855 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 ERCC4Q92889 916 aaPredicted RBP11.45□□□□□ -0.58
SRPK1-202ENST00000361690 PTMAP06454 111 aaKnown RBP11.45□□□□□ -0.58
SRPK1-202ENST00000361690 LETM2Q2VYF4 491 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 CEP57L1Q8IYX8 460 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 GMCL1P1Q8NEA9 526 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 ZBED3Q96IU2 234 aaPredicted RBP11.45□□□□□ -0.58
SRPK1-202ENST00000361690 NUP88Q99567 741 aaPredicted RBP11.45□□□□□ -0.58
SRPK1-202ENST00000361690 POLR2DO15514 142 aaKnown RBP11.45□□□□□ -0.58
SRPK1-202ENST00000361690 TBC1D12O60347 775 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 ASNSP08243 561 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 LMNB1P20700 586 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 ATP2C1P98194 919 aaPredicted RBP11.45□□□□□ -0.58
SRPK1-202ENST00000361690 PPP1R18Q6NYC8 613 aa11.45□□□□□ -0.58
SRPK1-202ENST00000361690 CUL5Q93034 780 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms