RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 ME3Q16798 604 aa20.88■□□□□ 0.93
CLK2-202ENST00000361168 NECAB1Q8N987 351 aa20.88■□□□□ 0.93
CLK2-202ENST00000361168 VAT1LQ9HCJ6 419 aa20.88■□□□□ 0.93
CLK2-202ENST00000361168 PRR12Q9ULL5 1215 aa20.88■□□□□ 0.93
CLK2-202ENST00000361168 DSG3P32926 999 aa20.87■□□□□ 0.93
CLK2-202ENST00000361168 SRBD1Q8N5C6 995 aaKnown RBP20.87■□□□□ 0.93
CLK2-202ENST00000361168 SMCR8Q8TEV9 937 aaPredicted RBP20.87■□□□□ 0.93
CLK2-202ENST00000361168 PIBF1Q8WXW3 757 aa20.87■□□□□ 0.93
CLK2-202ENST00000361168 SLF1Q9BQI6 1058 aa20.87■□□□□ 0.93
CLK2-202ENST00000361168 RBPJLQ9UBG7 517 aa20.87■□□□□ 0.93
CLK2-202ENST00000361168 CPA4Q9UI42 421 aa20.87■□□□□ 0.93
CLK2-202ENST00000361168 PPP1R9AQ9ULJ8 1098 aa20.87■□□□□ 0.93
CLK2-202ENST00000361168 hCG_1642624A0A1W2PR95 340 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 WBP1LQ9NX94 342 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 BTBD7Q9P203 1132 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 SLC45A1Q9Y2W3 748 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 GOLGA8AA7E2F4 631 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 METAP2P50579 478 aaKnown RBP eCLIP20.86■□□□□ 0.93
CLK2-202ENST00000361168 Q3C1V9 767 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 ASPRV1Q53RT3 343 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 GPATCH4Q5T3I0 446 aaKnown RBP20.86■□□□□ 0.93
CLK2-202ENST00000361168 OTUD7BQ6GQQ9 843 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 SYNE3Q6ZMZ3 975 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 ANKRD13CQ8N6S4 541 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 CTCFLQ8NI51 663 aaPredicted RBP20.86■□□□□ 0.93
CLK2-202ENST00000361168 PAGR1Q9BTK6 254 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 FEM1BQ9UK73 627 aa20.86■□□□□ 0.93
CLK2-202ENST00000361168 PARP14Q460N5 1801 aa20.85■□□□□ 0.93
CLK2-202ENST00000361168 VWA5AO00534 786 aa20.85■□□□□ 0.93
CLK2-202ENST00000361168 CA12O43570 354 aa20.85■□□□□ 0.93
CLK2-202ENST00000361168 OSBPP22059 807 aa20.85■□□□□ 0.93
CLK2-202ENST00000361168 ST3GAL1Q11201 340 aa20.85■□□□□ 0.93
CLK2-202ENST00000361168 SCRN1Q12765 414 aa20.85■□□□□ 0.93
CLK2-202ENST00000361168 PABPC4Q13310 644 aaKnown RBP eCLIP20.85■□□□□ 0.931e-13■■■□□ 14.8
CLK2-202ENST00000361168 ADGRF4Q8IZF3 695 aa20.85■□□□□ 0.93
CLK2-202ENST00000361168 PRPF38AQ8NAV1 312 aaKnown RBP20.85■□□□□ 0.93
CLK2-202ENST00000361168 PARK7Q99497 189 aaKnown RBP20.85■□□□□ 0.93
CLK2-202ENST00000361168 ADGRA2Q96PE1 1338 aa20.85■□□□□ 0.93
CLK2-202ENST00000361168 TLR2O60603 784 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 CNMDO75829 334 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 RTN1Q16799 776 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 BTNL9Q6UXG8 535 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 ZNF274Q96GC6 653 aaPredicted RBP20.84■□□□□ 0.93
CLK2-202ENST00000361168 JMJD4Q9H9V9 463 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 ADAMTS5Q9UNA0 930 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 MAP2K1Q02750 393 aaPredicted RBP20.84■□□□□ 0.93
CLK2-202ENST00000361168 TMEM132BQ14DG7 1078 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 SYDE2Q5VT97 1194 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 REM2Q8IYK8 340 aaPredicted RBP20.84■□□□□ 0.93
CLK2-202ENST00000361168 JMYQ8N9B5 988 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 REPS2Q8NFH8 660 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 HOXC10Q9NYD6 342 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 PNMA3Q9UL41 463 aa20.84■□□□□ 0.93
CLK2-202ENST00000361168 CALM1P0DP23 149 aa20.83■□□□□ 0.93
CLK2-202ENST00000361168 CALM2P0DP24 149 aa20.83■□□□□ 0.93
CLK2-202ENST00000361168 CALM3P0DP25 149 aa20.83■□□□□ 0.93
CLK2-202ENST00000361168 CAP1Q01518 475 aa20.83■□□□□ 0.93
CLK2-202ENST00000361168 ANKRD1Q15327 319 aa20.83■□□□□ 0.93
CLK2-202ENST00000361168 LBX2Q6XYB7 198 aa20.83■□□□□ 0.93
CLK2-202ENST00000361168 TMTC3Q6ZXV5 915 aa20.83■□□□□ 0.93
CLK2-202ENST00000361168 CPXCR1Q8N123 301 aa20.83■□□□□ 0.93
CLK2-202ENST00000361168 CHURC1Q8WUH1 139 aa20.83■□□□□ 0.93
CLK2-202ENST00000361168 MAP3K14Q99558 947 aa20.83■□□□□ 0.93
CLK2-202ENST00000361168 ZCCHC17Q9NP64 241 aaKnown RBP20.83■□□□□ 0.93
CLK2-202ENST00000361168 DHX16O60231 1041 aaKnown RBP20.82■□□□□ 0.92
CLK2-202ENST00000361168 FUT2Q10981 343 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 CCDC174Q6PII3 467 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 C17orf99Q6UX52 265 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 HOMER1Q86YM7 354 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 PHKBQ93100 1093 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 SLC38A10Q9HBR0 1119 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 ZFYVE28Q9HCC9 887 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 ZNF214Q9UL59 606 aaPredicted RBP20.82■□□□□ 0.92
CLK2-202ENST00000361168 LIMCH1Q9UPQ0 1083 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 ZNF536O15090 1300 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 ST18O60284 1047 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 PLA2G6O60733 806 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 ALDH1A1P00352 501 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 KIF5BP33176 963 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 SLC4A3P48751 1232 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 NTRK3Q16288 839 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 PIGSQ96S52 555 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 RAVER2Q9HCJ3 691 aaKnown RBP20.82■□□□□ 0.92
CLK2-202ENST00000361168 RIPK3Q9Y572 518 aa20.82■□□□□ 0.92
CLK2-202ENST00000361168 PPP1R11O60927 126 aaPredicted RBP20.81■□□□□ 0.92
CLK2-202ENST00000361168 FAM160B2Q86V87 743 aa20.81■□□□□ 0.92
CLK2-202ENST00000361168 AGBL1Q96MI9 1066 aa20.81■□□□□ 0.92
CLK2-202ENST00000361168 SMCHD1A6NHR9 2005 aa20.81■□□□□ 0.92
CLK2-202ENST00000361168 PFKFB2O60825 505 aa20.8■□□□□ 0.92
CLK2-202ENST00000361168 BCRP11274 1271 aa20.8■□□□□ 0.92
CLK2-202ENST00000361168 PLS1Q14651 629 aa20.8■□□□□ 0.92
CLK2-202ENST00000361168 SLKQ9H2G2 1235 aaPredicted RBP20.8■□□□□ 0.92
CLK2-202ENST00000361168 RIOX1Q9H6W3 641 aa20.8■□□□□ 0.92
CLK2-202ENST00000361168 COL11A1P12107 1806 aaPredicted RBP20.8■□□□□ 0.92
CLK2-202ENST00000361168 CTDNEP1O95476 244 aa20.8■□□□□ 0.92
CLK2-202ENST00000361168 CTGFP29279 349 aa20.8■□□□□ 0.92
CLK2-202ENST00000361168 PORCNQ9H237 461 aa20.8■□□□□ 0.92
CLK2-202ENST00000361168 RANBP17Q9H2T7 1088 aaKnown RBP20.8■□□□□ 0.92
CLK2-202ENST00000361168 NID2Q14112 1375 aa20.8■□□□□ 0.92
CLK2-202ENST00000361168 RCAN1P53805 252 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 213.1 ms