RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 RESP18Q5W5W9 173 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 DYNLL2Q96FJ2 89 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 PLEKHA4Q9H4M7 779 aa18.15■□□□□ 0.5
SCAF1-201ENST00000360565 CEP104O60308 925 aa18.14■□□□□ 0.5
SCAF1-201ENST00000360565 FAM182BQ5T319 152 aa18.14■□□□□ 0.5
SCAF1-201ENST00000360565 ANKRD13CQ8N6S4 541 aa18.14■□□□□ 0.5
SCAF1-201ENST00000360565 CDC23Q9UJX2 597 aa18.14■□□□□ 0.5
SCAF1-201ENST00000360565 USP21Q9UK80 565 aa18.14■□□□□ 0.5
SCAF1-201ENST00000360565 PCDHA4Q9UN74 947 aa18.14■□□□□ 0.5
SCAF1-201ENST00000360565 CD163L1Q9NR16 1453 aa18.14■□□□□ 0.5
SCAF1-201ENST00000360565 GCNT3O95395 438 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 PDIA6Q15084 440 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 RABEP2Q9H5N1 569 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 TNFAIP3P21580 790 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 ATP2B4P23634 1241 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 GPBP1Q86WP2 473 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 KLHL7Q8IXQ5 586 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 PCDHB13Q9Y5F0 798 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 GOLGA6BA6NDN3 693 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 CASP1P29466 404 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 MECOMQ03112 1051 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 TTLL12Q14166 644 aaPredicted RBP18.14■□□□□ 0.49
SCAF1-201ENST00000360565 CCDC25Q86WR0 208 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 STAG1Q8WVM7 1258 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 TEKT1Q969V4 418 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 MRPL44Q9H9J2 332 aaKnown RBP18.14■□□□□ 0.49
SCAF1-201ENST00000360565 LY9Q9HBG7 655 aa18.14■□□□□ 0.49
SCAF1-201ENST00000360565 ZNF335Q9H4Z2 1342 aaPredicted RBP18.14■□□□□ 0.49
SCAF1-201ENST00000360565 ARHGEF35A5YM69 484 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 GOLGA6CA6NDK9 693 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 B4DLN1 442 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 CALUO43852 315 aaPredicted RBP18.13■□□□□ 0.49
SCAF1-201ENST00000360565 GOLGA6DP0CG33 693 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 MNAT1P51948 309 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 MICALL1Q8N3F8 863 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 MYCT1Q8N699 235 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 UBLCP1Q8WVY7 318 aaPredicted RBP18.13■□□□□ 0.49
SCAF1-201ENST00000360565 ARHGEF10LQ9HCE6 1279 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 GOLGA6AQ9NYA3 693 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 SOWAHDA6NJG2 315 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 RABGGTAQ92696 567 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 PAGE5Q96GU1 130 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 TRIM58Q8NG06 486 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 ATP6V0A2Q9Y487 856 aa18.13■□□□□ 0.49
SCAF1-201ENST00000360565 FAM170AA1A519 330 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 KIF28PB7ZC32 967 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 ENC1O14682 589 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 EEF2P13639 858 aaKnown RBP18.12■□□□□ 0.49
SCAF1-201ENST00000360565 HPDP32754 393 aaPredicted RBP18.12■□□□□ 0.49
SCAF1-201ENST00000360565 CFAP221Q4G0U5 840 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 IFT20Q8IY31 132 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 OXER1Q8TDS5 423 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 KAZALD1Q96I82 304 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 CNOT6LQ96LI5 555 aaKnown RBP18.12■□□□□ 0.49
SCAF1-201ENST00000360565 HINFPQ9BQA5 517 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 PXDNLA1KZ92 1463 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 VWDEQ8N2E2 1590 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 NAA30Q147X3 362 aaPredicted RBP18.12■□□□□ 0.49
SCAF1-201ENST00000360565 TRIM31Q9BZY9 425 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 RIPOR2Q9Y4F9 1068 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 DDX39AO00148 427 aaKnown RBP18.12■□□□□ 0.49
SCAF1-201ENST00000360565 SEC31AO94979 1220 aaKnown RBP18.12■□□□□ 0.49
SCAF1-201ENST00000360565 CYP19A1P11511 503 aaPredicted RBP18.12■□□□□ 0.49
SCAF1-201ENST00000360565 DOK7Q18PE1 504 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 GRIPAP1Q4V328 841 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 FAM26FQ5R3K3 315 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 KIAA0825Q8IV33 1275 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 OTUD6BQ8N6M0 293 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 CCDC26Q8TAB7 109 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 RPGRIP1Q96KN7 1286 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 SRP68Q9UHB9 627 aaKnown RBP18.12■□□□□ 0.49
SCAF1-201ENST00000360565 SALL3Q9BXA9 1300 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 CDHR2Q9BYE9 1310 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 PPARDQ03181 441 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 PRR16Q569H4 304 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 SRGAP1Q7Z6B7 1085 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 ACRBPQ8NEB7 543 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 LSM14BQ9BX40 385 aaKnown RBP18.12■□□□□ 0.49
SCAF1-201ENST00000360565 LEMD3Q9Y2U8 911 aa18.12■□□□□ 0.49
SCAF1-201ENST00000360565 PALLDQ8WX93 1383 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 XDHP47989 1333 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 USP17L3A6NCW0 530 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 USP17L4A6NCW7 530 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 BACH1O14867 736 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 RFX5P48382 616 aaPredicted RBP18.11■□□□□ 0.49
SCAF1-201ENST00000360565 ZRSR2Q15696 482 aaKnown RBP18.11■□□□□ 0.49
SCAF1-201ENST00000360565 USP17L1Q7RTZ2 530 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 CPXCR1Q8N123 301 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 SELENOSQ9BQE4 189 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 UBN2Q6ZU65 1347 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 GSG1L2A8MUP6 293 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 TMEM232C9JQI7 657 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 EXOC3O60645 756 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 FLOT1O75955 427 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 PRDX5P30044 214 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 RPS6KA1Q15418 735 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 USP17L2Q6R6M4 530 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 IMPG2Q9BZV3 1241 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 BSDC1Q9NW68 430 aaPredicted RBP18.11■□□□□ 0.49
SCAF1-201ENST00000360565 PHLPP2Q6ZVD8 1323 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms