RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PTPN21Q16825 1174 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 HAUS8Q9BT25 410 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 LRRD1A4D1F6 860 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 RNMTO43148 476 aaKnown RBP17.59■□□□□ 0.41
COL18A1-203ENST00000359759 SLC12A1Q13621 1099 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 IFT122Q9HBG6 1241 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 HAUS2Q9NVX0 235 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 XRCC5P13010 732 aaKnown RBP17.59■□□□□ 0.41
COL18A1-203ENST00000359759 IFT88Q13099 833 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 WDR7Q9Y4E6 1490 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 DNM2P50570 870 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 FIS1Q9Y3D6 152 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 ZMYND10O75800 440 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 GUCY2DQ02846 1103 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 MCUQ8NE86 351 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 STK24Q9Y6E0 443 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 ZNF532Q9HCE3 1301 aa17.59■□□□□ 0.41
COL18A1-203ENST00000359759 EYA2O00167 538 aa17.58■□□□□ 0.41
COL18A1-203ENST00000359759 TRPA1O75762 1119 aa17.58■□□□□ 0.41
COL18A1-203ENST00000359759 PANK4Q9NVE7 773 aa17.58■□□□□ 0.41
COL18A1-203ENST00000359759 ZNF215Q9UL58 517 aaPredicted RBP17.58■□□□□ 0.41
COL18A1-203ENST00000359759 CAPN9O14815 690 aa17.58■□□□□ 0.41
COL18A1-203ENST00000359759 RAPH1Q70E73 1250 aa17.58■□□□□ 0.41
COL18A1-203ENST00000359759 RNF169Q8NCN4 708 aa17.58■□□□□ 0.41
COL18A1-203ENST00000359759 DKC1O60832 514 aaKnown RBP eCLIP17.58■□□□□ 0.43e-7■■■■■ 31.1
COL18A1-203ENST00000359759 ARHGAP4P98171 946 aa17.58■□□□□ 0.4
COL18A1-203ENST00000359759 CCDC84Q86UT8 332 aaPredicted RBP17.58■□□□□ 0.4
COL18A1-203ENST00000359759 SESTD1Q86VW0 696 aa17.58■□□□□ 0.4
COL18A1-203ENST00000359759 ZBED4O75132 1171 aa17.58■□□□□ 0.4
COL18A1-203ENST00000359759 ME3Q16798 604 aa17.58■□□□□ 0.4
COL18A1-203ENST00000359759 FAM133BQ5BKY9 247 aaKnown RBP17.58■□□□□ 0.4
COL18A1-203ENST00000359759 ENC1O14682 589 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 SART1O43290 800 aaKnown RBP17.57■□□□□ 0.4
COL18A1-203ENST00000359759 LUC7L3O95232 432 aaKnown RBP17.57■□□□□ 0.4
COL18A1-203ENST00000359759 TMED1Q13445 227 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 NUCKS1Q9H1E3 243 aaKnown RBP17.57■□□□□ 0.4
COL18A1-203ENST00000359759 E7EWF7 191 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 GNA14O95837 355 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 CNGA1P29973 690 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 PDE6CP51160 858 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 LRRC8AQ8IWT6 810 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 OR8K1Q8NGG5 319 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 SMCO2A6NFE2 343 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 P4HA1P13674 534 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 EEF1GP26641 437 aaKnown RBP17.57■□□□□ 0.4
COL18A1-203ENST00000359759 ZAP70P43403 619 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 ZKSCAN8Q15776 578 aaPredicted RBP17.57■□□□□ 0.4
COL18A1-203ENST00000359759 DEPTORQ8TB45 409 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 GOLGA5Q8TBA6 731 aa17.57■□□□□ 0.4
COL18A1-203ENST00000359759 DLATP10515 647 aaKnown RBP17.56■□□□□ 0.4
COL18A1-203ENST00000359759 SNX1Q13596 522 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 HADHQ16836 314 aaKnown RBP17.56■□□□□ 0.4
COL18A1-203ENST00000359759 NLRP7Q8WX94 980 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 K7ENM7 598 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 YWHAGP61981 247 aaKnown RBP eCLIP17.56■□□□□ 0.4
COL18A1-203ENST00000359759 RASSF7Q02833 373 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 INTUQ9ULD6 942 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 ZBBXA8MT70 800 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 M0QZ92 97 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 SGSM2O43147 1006 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 TTC4O95801 387 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 EFCAB8A8MWE9 144 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 GNGT2O14610 69 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 MYOCDQ8IZQ8 938 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
COL18A1-203ENST00000359759 BFSP1Q12934 665 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 CLIC6Q96NY7 704 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 SLC39A2Q9NP94 309 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 SGK1O00141 431 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 GAS7O60861 476 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 CDR2Q01850 454 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 SCYL3Q8IZE3 742 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 ANKRD13CQ8N6S4 541 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 SPATA5Q8NB90 893 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 EEF2KMTQ96G04 330 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 RPGRIP1Q96KN7 1286 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 GGA1Q9UJY5 639 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 ZNF148Q9UQR1 794 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 TRPC6Q9Y210 931 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 IVNS1ABPQ9Y6Y0 642 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 LMTK3Q96Q04 1460 aa17.56■□□□□ 0.4
COL18A1-203ENST00000359759 DDX17Q92841 729 aaKnown RBP17.55■□□□□ 0.4
COL18A1-203ENST00000359759 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
COL18A1-203ENST00000359759 BRDTQ58F21 947 aaPredicted RBP17.55■□□□□ 0.4
COL18A1-203ENST00000359759 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 PPWD1Q96BP3 646 aaKnown RBP17.55■□□□□ 0.4
COL18A1-203ENST00000359759 H7C0C1 242 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 ATP5OP48047 213 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 LIG4P49917 911 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 TFAP4Q01664 338 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 TCP11Q8WWU5 503 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 SUCLG2Q96I99 432 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 TYW1Q9NV66 732 aaKnown RBP17.55■□□□□ 0.4
COL18A1-203ENST00000359759 KIAA1468Q9P260 1216 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 C2orf54Q08AI8 447 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 TRAPPC3LQ5T215 181 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 CD2APQ9Y5K6 639 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 RFX1P22670 979 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 EHHADHQ08426 723 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 PIP4K2CQ8TBX8 421 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms