RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 GRM4Q14833 912 aa20.87■□□□□ 0.93
PDLIM7-202ENST00000355841 Q3C1V9 767 aa20.87■□□□□ 0.93
PDLIM7-202ENST00000355841 PRPF38AQ8NAV1 312 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-202ENST00000355841 RLFQ13129 1914 aa20.87■□□□□ 0.93
PDLIM7-202ENST00000355841 DDAH1O94760 285 aa20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 GCLCP48506 637 aaPredicted RBP20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 LBX1P52954 281 aa20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 ASPRV1Q53RT3 343 aa20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 GPATCH4Q5T3I0 446 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 CHURC1Q8WUH1 139 aa20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 ZNF296Q8WUU4 475 aaPredicted RBP20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 AGXT2Q9BYV1 514 aa20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 PRR12Q9ULL5 1215 aa20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 LBX2Q6XYB7 198 aa20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 NOL8Q76FK4 1167 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 FAM160B2Q86V87 743 aa20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 ADAMTS5Q9UNA0 930 aa20.86■□□□□ 0.93
PDLIM7-202ENST00000355841 PALM3A6NDB9 673 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 KLRF2D3W0D1 207 aa20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 CAP1Q01518 475 aa20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 PLS1Q14651 629 aa20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 TMEM132BQ14DG7 1078 aa20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 SYDE2Q5VT97 1194 aa20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 SYNE3Q6ZMZ3 975 aa20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 NBPF11Q86T75 865 aa20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 CMTR1Q8N1G2 835 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 FBXL16Q8N461 479 aa20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 MYPNQ86TC9 1320 aa20.85■□□□□ 0.93
PDLIM7-202ENST00000355841 GOLGA8BA8MQT2 603 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 ZBTB43O43298 467 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 CTCFP49711 727 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 AK2P54819 239 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 ERVK-9P63128 1117 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 ERVK-24P63145 666 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 SP3Q02447 781 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 SLC35G1Q2M3R5 365 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 BTNL9Q6UXG8 535 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 CPXCR1Q8N123 301 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 GPRC5AQ8NFJ5 357 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 CTCFLQ8NI51 663 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 ARHGAP39Q9C0H5 1083 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 VAT1LQ9HCJ6 419 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 RABGAP1Q9Y3P9 1069 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 PARP14Q460N5 1801 aa20.84■□□□□ 0.93
PDLIM7-202ENST00000355841 PLA2G6O60733 806 aa20.83■□□□□ 0.93
PDLIM7-202ENST00000355841 SLC4A3P48751 1232 aa20.83■□□□□ 0.93
PDLIM7-202ENST00000355841 FAM110CQ1W6H9 321 aa20.83■□□□□ 0.93
PDLIM7-202ENST00000355841 CCDC174Q6PII3 467 aa20.83■□□□□ 0.93
PDLIM7-202ENST00000355841 FANCBQ8NB91 859 aa20.83■□□□□ 0.93
PDLIM7-202ENST00000355841 REPS2Q8NFH8 660 aa20.83■□□□□ 0.93
PDLIM7-202ENST00000355841 MORF4L1Q9UBU8 362 aa20.83■□□□□ 0.93
PDLIM7-202ENST00000355841 DHX16O60231 1041 aaKnown RBP20.83■□□□□ 0.92
PDLIM7-202ENST00000355841 PLEKHA8P1O95397 391 aa20.83■□□□□ 0.92
PDLIM7-202ENST00000355841 TAL1P17542 331 aaPredicted RBP20.83■□□□□ 0.92
PDLIM7-202ENST00000355841 CTGFP29279 349 aa20.83■□□□□ 0.92
PDLIM7-202ENST00000355841 ADGRF4Q8IZF3 695 aa20.83■□□□□ 0.92
PDLIM7-202ENST00000355841 CD99L2Q8TCZ2 262 aa20.83■□□□□ 0.92
PDLIM7-202ENST00000355841 GTF3C2Q8WUA4 911 aaPredicted RBP20.83■□□□□ 0.92
PDLIM7-202ENST00000355841 SLC38A10Q9HBR0 1119 aa20.83■□□□□ 0.92
PDLIM7-202ENST00000355841 RAVER2Q9HCJ3 691 aaKnown RBP20.83■□□□□ 0.92
PDLIM7-202ENST00000355841 HPS5Q9UPZ3 1129 aa20.83■□□□□ 0.92
PDLIM7-202ENST00000355841 GOLGA8AA7E2F4 631 aa20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 FKTNO75072 461 aa20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 ZBED4O75132 1171 aa20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 CALM1P0DP23 149 aa20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 CALM2P0DP24 149 aa20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 CALM3P0DP25 149 aa20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 CCDC82Q8N4S0 544 aa20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 MB21D1Q8N884 522 aa20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 PIBF1Q8WXW3 757 aa20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 PORCNQ9H237 461 aa20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 ZNF214Q9UL59 606 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 CTDP1Q9Y5B0 961 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-202ENST00000355841 PDIA3P30101 505 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-202ENST00000355841 KIF5BP33176 963 aa20.81■□□□□ 0.92
PDLIM7-202ENST00000355841 LACTBP83111 547 aaPredicted RBP20.81■□□□□ 0.92
PDLIM7-202ENST00000355841 STK3Q13188 491 aa20.81■□□□□ 0.92
PDLIM7-202ENST00000355841 MAP3K14Q99558 947 aa20.81■□□□□ 0.92
PDLIM7-202ENST00000355841 SPATC1LQ9H0A9 340 aa20.81■□□□□ 0.92
PDLIM7-202ENST00000355841 EFCC1Q9HA90 598 aa20.81■□□□□ 0.92
PDLIM7-202ENST00000355841 TPCN1Q9ULQ1 816 aa20.81■□□□□ 0.92
PDLIM7-202ENST00000355841 CYTH3O43739 400 aa20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 CDC27P30260 824 aa20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 METAP2P50579 478 aaKnown RBP eCLIP20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 EVCP57679 992 aa20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 CCT2P78371 535 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 RTN1Q16799 776 aa20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 SRBD1Q8N5C6 995 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 AGBL1Q96MI9 1066 aa20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 MOV10L1Q9BXT6 1211 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 ALDH8A1Q9H2A2 487 aaPredicted RBP20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 JMJD4Q9H9V9 463 aa20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 NCOA5Q9HCD5 579 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 FAM217BQ9NTX9 383 aaPredicted RBP20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 ADD1P35611 737 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 STAT3P40763 770 aa20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 RABEP1Q15276 862 aa20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 WDR78Q5VTH9 848 aa20.8■□□□□ 0.92
PDLIM7-202ENST00000355841 SNRNP48Q6IEG0 339 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms