RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 ZNF467Q7Z7K2 595 aaPredicted RBP19.01■□□□□ 0.63
COPE-202ENST00000349893 TMEM199Q8N511 208 aa19.01■□□□□ 0.63
COPE-202ENST00000349893 FRAT1Q92837 279 aaPredicted RBP19.01■□□□□ 0.63
COPE-202ENST00000349893 DYNLL2Q96FJ2 89 aa19.01■□□□□ 0.63
COPE-202ENST00000349893 GLT1D1Q96MS3 346 aa19.01■□□□□ 0.63
COPE-202ENST00000349893 UPF3AQ9H1J1 476 aaKnown RBP19.01■□□□□ 0.63
COPE-202ENST00000349893 MYADML2A6NDP7 307 aa19■□□□□ 0.63
COPE-202ENST00000349893 NKX3-2P78367 333 aa19■□□□□ 0.63
COPE-202ENST00000349893 RAB30Q15771 203 aa19■□□□□ 0.63
COPE-202ENST00000349893 CCDC129Q6ZRS4 1044 aa19■□□□□ 0.63
COPE-202ENST00000349893 ZNF365Q70YC5 407 aa19■□□□□ 0.63
COPE-202ENST00000349893 FAM126BQ8IXS8 530 aa19■□□□□ 0.63
COPE-202ENST00000349893 LCORLQ8N3X6 602 aa19■□□□□ 0.63
COPE-202ENST00000349893 PCSK9Q8NBP7 692 aaKnown RBP19■□□□□ 0.63
COPE-202ENST00000349893 PPM1EQ8WY54 764 aa19■□□□□ 0.63
COPE-202ENST00000349893 HERVK_113Q902F9 699 aa19■□□□□ 0.63
COPE-202ENST00000349893 ZNF532Q9HCE3 1301 aa19■□□□□ 0.63
COPE-202ENST00000349893 ARVCFO00192 962 aa18.99■□□□□ 0.63
COPE-202ENST00000349893 EEF2P13639 858 aaKnown RBP18.99■□□□□ 0.63
COPE-202ENST00000349893 FAM122AQ96E09 287 aa18.99■□□□□ 0.63
COPE-202ENST00000349893 ATP8A2Q9NTI2 1148 aa18.99■□□□□ 0.63
COPE-202ENST00000349893 CXXC1Q9P0U4 656 aaPredicted RBP18.99■□□□□ 0.63
COPE-202ENST00000349893 GBF1Q92538 1859 aa18.99■□□□□ 0.63
COPE-202ENST00000349893 GREB1LQ9C091 1923 aaPredicted RBP18.98■□□□□ 0.63
COPE-202ENST00000349893 A0A0U1RQG5 324 aaPredicted RBP18.98■□□□□ 0.63
COPE-202ENST00000349893 ADCY6O43306 1168 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 CD4P01730 458 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 ASGR1P07306 291 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 GJA9P57773 515 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 C12orf60Q5U649 245 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 AACSQ86V21 672 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.98■□□□□ 0.63
COPE-202ENST00000349893 C1orf115Q9H7X2 142 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 KANSL2Q9H9L4 492 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 GOPCQ9HD26 462 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 IL23AQ9NPF7 189 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 MSRAQ9UJ68 235 aa18.98■□□□□ 0.63
COPE-202ENST00000349893 BAZ2AQ9UIF9 1905 aaKnown RBP18.98■□□□□ 0.63
COPE-202ENST00000349893 ATP2A1O14983 1001 aa18.97■□□□□ 0.63
COPE-202ENST00000349893 ACRP10323 421 aa18.97■□□□□ 0.63
COPE-202ENST00000349893 HOXD11P31277 338 aaPredicted RBP18.97■□□□□ 0.63
COPE-202ENST00000349893 CDK8P49336 464 aa18.97■□□□□ 0.63
COPE-202ENST00000349893 ZKSCAN2Q63HK3 967 aa18.97■□□□□ 0.63
COPE-202ENST00000349893 SAMD1Q6SPF0 538 aaPredicted RBP18.97■□□□□ 0.63
COPE-202ENST00000349893 C16orf86Q6ZW13 317 aa18.97■□□□□ 0.63
COPE-202ENST00000349893 ERC1Q8IUD2 1116 aa18.97■□□□□ 0.63
COPE-202ENST00000349893 TEX13BQ9BXU2 312 aa18.97■□□□□ 0.63
COPE-202ENST00000349893 ARIH1Q9Y4X5 557 aaPredicted RBP18.97■□□□□ 0.63
COPE-202ENST00000349893 CTAGE5O15320 804 aa18.96■□□□□ 0.63
COPE-202ENST00000349893 BMP1P13497 986 aa18.96■□□□□ 0.63
COPE-202ENST00000349893 IRX5P78411 483 aaPredicted RBP18.96■□□□□ 0.63
COPE-202ENST00000349893 ACVR2BQ13705 512 aa18.96■□□□□ 0.63
COPE-202ENST00000349893 SLC43A3Q8NBI5 491 aa18.96■□□□□ 0.63
COPE-202ENST00000349893 FGD4Q96M96 766 aa18.96■□□□□ 0.63
COPE-202ENST00000349893 C1QTNF1Q9BXJ1 281 aa18.96■□□□□ 0.63
COPE-202ENST00000349893 ABHD16BQ9H3Z7 469 aa18.96■□□□□ 0.63
COPE-202ENST00000349893 ZHX1Q9UKY1 873 aaPredicted RBP18.96■□□□□ 0.63
COPE-202ENST00000349893 YBX2Q9Y2T7 364 aaKnown RBP18.96■□□□□ 0.63
COPE-202ENST00000349893 SMIM22K7EJ46 135 aa18.95■□□□□ 0.62
COPE-202ENST00000349893 C6orf222P0C671 652 aaPredicted RBP18.95■□□□□ 0.62
COPE-202ENST00000349893 CCDC85BQ15834 202 aaPredicted RBP18.95■□□□□ 0.62
COPE-202ENST00000349893 FAM83BQ5T0W9 1011 aa18.95■□□□□ 0.62
COPE-202ENST00000349893 ARMT1Q9H993 441 aa18.95■□□□□ 0.62
COPE-202ENST00000349893 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.95■□□□□ 0.62
COPE-202ENST00000349893 RIPK3Q9Y572 518 aa18.95■□□□□ 0.62
COPE-202ENST00000349893 MCM3APO60318 1980 aa18.95■□□□□ 0.62
COPE-202ENST00000349893 TLR3O15455 904 aaKnown RBP18.94■□□□□ 0.62
COPE-202ENST00000349893 PRKAB2O43741 272 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 IGFBP4P22692 258 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 CCDC144BQ3MJ40 725 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 SNRNP48Q6IEG0 339 aaKnown RBP18.94■□□□□ 0.62
COPE-202ENST00000349893 CEP85Q6P2H3 762 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 IL27Q8NEV9 243 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 SLF1Q9BQI6 1058 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.94■□□□□ 0.62
COPE-202ENST00000349893 PPP1R12CQ9BZL4 782 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 KATNBL1Q9H079 304 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 MTIF3Q9H2K0 278 aaKnown RBP18.94■□□□□ 0.62
COPE-202ENST00000349893 NKX2-4Q9H2Z4 354 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 SLC28A3Q9HAS3 691 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 SPC25Q9HBM1 224 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 ZBED9Q6R2W3 1325 aa18.94■□□□□ 0.62
COPE-202ENST00000349893 CYP2C18P33260 490 aa18.93■□□□□ 0.62
COPE-202ENST00000349893 GNASQ5JWF2 1037 aa18.93■□□□□ 0.62
COPE-202ENST00000349893 DDX11Q96FC9 970 aa18.93■□□□□ 0.62
COPE-202ENST00000349893 TSPYL2Q9H2G4 693 aaPredicted RBP18.93■□□□□ 0.62
COPE-202ENST00000349893 EXOC6BQ9Y2D4 811 aa18.93■□□□□ 0.62
COPE-202ENST00000349893 CYP2D7A0A087X1C5 515 aa18.92■□□□□ 0.62
COPE-202ENST00000349893 USP17L12C9JPN9 530 aa18.92■□□□□ 0.62
COPE-202ENST00000349893 USP17L21D6R901 530 aa18.92■□□□□ 0.62
COPE-202ENST00000349893 GOLIM4O00461 696 aa18.92■□□□□ 0.62
COPE-202ENST00000349893 MBD4O95243 580 aa18.92■□□□□ 0.62
COPE-202ENST00000349893 FGBP02675 491 aa18.92■□□□□ 0.62
COPE-202ENST00000349893 ADD2P35612 726 aa18.92■□□□□ 0.62
COPE-202ENST00000349893 TCF20Q9UGU0 1960 aaKnown RBP18.92■□□□□ 0.62
COPE-202ENST00000349893 POU3F3P20264 500 aaPredicted RBP18.91■□□□□ 0.62
COPE-202ENST00000349893 AAK1Q2M2I8 961 aa18.91■□□□□ 0.62
COPE-202ENST00000349893 PRPF38AQ8NAV1 312 aaKnown RBP18.91■□□□□ 0.62
COPE-202ENST00000349893 VTI1AQ96AJ9 217 aa18.91■□□□□ 0.62
COPE-202ENST00000349893 NECAB3Q96P71 396 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 789.1 ms