RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 SYNPO2Q9UMS6 1093 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 PHF20L1A8MW92 1017 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 CTNND1O60716 968 aaKnown RBP19.95■□□□□ 0.78
CLDN4-201ENST00000340958 CELF2O95319 508 aaKnown RBP19.95■□□□□ 0.78
CLDN4-201ENST00000340958 MBD3O95983 291 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 NDUFB10O96000 172 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 U2AF2P26368 475 aaKnown RBP eCLIP19.95■□□□□ 0.78
CLDN4-201ENST00000340958 CALML3P27482 149 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 SLC16A2P36021 539 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 ZYXQ15942 572 aaKnown RBP19.95■□□□□ 0.78
CLDN4-201ENST00000340958 SPICE1Q8N0Z3 855 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 CCDC12Q8WUD4 166 aaPredicted RBP19.95■□□□□ 0.78
CLDN4-201ENST00000340958 GZF1Q9H116 711 aaPredicted RBP19.95■□□□□ 0.78
CLDN4-201ENST00000340958 RIOX1Q9H6W3 641 aa19.95■□□□□ 0.78
CLDN4-201ENST00000340958 A0A1W2PRG0 241 aa19.94■□□□□ 0.78
CLDN4-201ENST00000340958 BMP3P12645 472 aa19.94■□□□□ 0.78
CLDN4-201ENST00000340958 UBE2HP62256 183 aa19.94■□□□□ 0.78
CLDN4-201ENST00000340958 SLC35G1Q2M3R5 365 aa19.94■□□□□ 0.78
CLDN4-201ENST00000340958 ADGRF4Q8IZF3 695 aa19.94■□□□□ 0.78
CLDN4-201ENST00000340958 ACER1Q8TDN7 264 aa19.94■□□□□ 0.78
CLDN4-201ENST00000340958 LEO1Q8WVC0 666 aaPredicted RBP19.94■□□□□ 0.78
CLDN4-201ENST00000340958 GMCL1Q96IK5 515 aa19.94■□□□□ 0.78
CLDN4-201ENST00000340958 TMX2Q9Y320 296 aa19.94■□□□□ 0.78
CLDN4-201ENST00000340958 NAPAP54920 295 aa19.93■□□□□ 0.78
CLDN4-201ENST00000340958 SF3A1Q15459 793 aaKnown RBP19.93■□□□□ 0.78
CLDN4-201ENST00000340958 KLHL40Q2TBA0 621 aa19.93■□□□□ 0.78
CLDN4-201ENST00000340958 WWC2Q6AWC2 1192 aa19.93■□□□□ 0.78
CLDN4-201ENST00000340958 USP28Q96RU2 1077 aa19.93■□□□□ 0.78
CLDN4-201ENST00000340958 WRNIP1Q96S55 665 aa19.93■□□□□ 0.78
CLDN4-201ENST00000340958 NUP88Q99567 741 aaPredicted RBP19.93■□□□□ 0.78
CLDN4-201ENST00000340958 PICK1Q9NRD5 415 aa19.93■□□□□ 0.78
CLDN4-201ENST00000340958 GINM1Q9NU53 330 aa19.93■□□□□ 0.78
CLDN4-201ENST00000340958 BAZ2BQ9UIF8 2168 aaKnown RBP19.93■□□□□ 0.78
CLDN4-201ENST00000340958 GADD45BO75293 160 aaPredicted RBP19.92■□□□□ 0.78
CLDN4-201ENST00000340958 NR5A1Q13285 461 aa19.92■□□□□ 0.78
CLDN4-201ENST00000340958 STK38Q15208 465 aa19.92■□□□□ 0.78
CLDN4-201ENST00000340958 OXER1Q8TDS5 423 aa19.92■□□□□ 0.78
CLDN4-201ENST00000340958 CDCA5Q96FF9 252 aa19.92■□□□□ 0.78
CLDN4-201ENST00000340958 FTOQ9C0B1 505 aaKnown RBP eCLIP19.92■□□□□ 0.78
CLDN4-201ENST00000340958 BARHL2Q9NY43 387 aa19.92■□□□□ 0.78
CLDN4-201ENST00000340958 TCHHQ07283 1943 aa19.92■□□□□ 0.78
CLDN4-201ENST00000340958 TMEM232C9JQI7 657 aa19.92■□□□□ 0.78
CLDN4-201ENST00000340958 PRKG1Q13976 671 aa19.92■□□□□ 0.78
CLDN4-201ENST00000340958 CCDC84Q86UT8 332 aaPredicted RBP19.92■□□□□ 0.78
CLDN4-201ENST00000340958 ELP1O95163 1332 aa19.91■□□□□ 0.78
CLDN4-201ENST00000340958 INPP5BP32019 993 aa19.91■□□□□ 0.78
CLDN4-201ENST00000340958 DNAJC5GQ8N7S2 189 aa19.91■□□□□ 0.78
CLDN4-201ENST00000340958 JMJD4Q9H9V9 463 aa19.91■□□□□ 0.78
CLDN4-201ENST00000340958 RTEL1Q9NZ71 1219 aa19.91■□□□□ 0.78
CLDN4-201ENST00000340958 PNMA6FA0A0J9YX94 578 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 USP17L10C9JJH3 530 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 STXBP3O00186 592 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 ATP2B1P20020 1258 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 GPT2Q8TD30 523 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 SHISA4Q96DD7 197 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 ABT1Q9ULW3 272 aaKnown RBP19.9■□□□□ 0.78
CLDN4-201ENST00000340958 PCDHA4Q9UN74 947 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 CLIC4Q9Y696 253 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 hCG_1984214I3L0E3 225 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 ZBTB5O15062 677 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 ME1P48163 572 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 RILPL1Q5EBL4 403 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 ANO1Q5XXA6 986 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 SCYL3Q8IZE3 742 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 BLIDQ8IZY5 108 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 ZNF713Q8N859 430 aaPredicted RBP19.9■□□□□ 0.78
CLDN4-201ENST00000340958 ZKSCAN4Q969J2 545 aaPredicted RBP19.9■□□□□ 0.78
CLDN4-201ENST00000340958 VCPKMTQ9H867 229 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 C6orf50Q9HD87 102 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 POLR3EQ9NVU0 708 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.9■□□□□ 0.78
CLDN4-201ENST00000340958 NOL7Q9UMY1 257 aaKnown RBP19.9■□□□□ 0.78
CLDN4-201ENST00000340958 FZD1Q9UP38 647 aa19.9■□□□□ 0.78
CLDN4-201ENST00000340958 GNA11P29992 359 aa19.89■□□□□ 0.77
CLDN4-201ENST00000340958 NF2P35240 595 aa19.89■□□□□ 0.77
CLDN4-201ENST00000340958 FAM83BQ5T0W9 1011 aa19.89■□□□□ 0.77
CLDN4-201ENST00000340958 GALNT17Q6IS24 598 aa19.89■□□□□ 0.77
CLDN4-201ENST00000340958 CAVIN1Q6NZI2 390 aaKnown RBP19.89■□□□□ 0.77
CLDN4-201ENST00000340958 FAM177A1Q8N128 213 aaPredicted RBP19.89■□□□□ 0.77
CLDN4-201ENST00000340958 AS3MTQ9HBK9 375 aa19.89■□□□□ 0.77
CLDN4-201ENST00000340958 SMCO2A6NFE2 343 aa19.88■□□□□ 0.77
CLDN4-201ENST00000340958 STAT2P52630 851 aa19.88■□□□□ 0.77
CLDN4-201ENST00000340958 SYDE2Q5VT97 1194 aa19.88■□□□□ 0.77
CLDN4-201ENST00000340958 SAMD1Q6SPF0 538 aaPredicted RBP19.88■□□□□ 0.77
CLDN4-201ENST00000340958 BICD2Q8TD16 824 aa19.88■□□□□ 0.77
CLDN4-201ENST00000340958 KCNG4Q8TDN1 519 aa19.88■□□□□ 0.77
CLDN4-201ENST00000340958 RCOR1Q9UKL0 485 aa19.88■□□□□ 0.77
CLDN4-201ENST00000340958 PPP1R12BO60237 982 aaPredicted RBP19.88■□□□□ 0.77
CLDN4-201ENST00000340958 CDC37Q16543 378 aaPredicted RBP19.88■□□□□ 0.77
CLDN4-201ENST00000340958 SYAP1Q96A49 352 aaPredicted RBP19.88■□□□□ 0.77
CLDN4-201ENST00000340958 COA7Q96BR5 231 aa19.88■□□□□ 0.77
CLDN4-201ENST00000340958 ZNF112Q9UJU3 913 aa19.88■□□□□ 0.77
CLDN4-201ENST00000340958 TLL2Q9Y6L7 1015 aa19.88■□□□□ 0.77
CLDN4-201ENST00000340958 YEATS4O95619 227 aa19.87■□□□□ 0.77
CLDN4-201ENST00000340958 TYW1BQ6NUM6 668 aa19.87■□□□□ 0.77
CLDN4-201ENST00000340958 PIK3AP1Q6ZUJ8 805 aa19.87■□□□□ 0.77
CLDN4-201ENST00000340958 SAPCD2Q86UD0 394 aa19.87■□□□□ 0.77
CLDN4-201ENST00000340958 KLRG1Q96E93 195 aa19.87■□□□□ 0.77
CLDN4-201ENST00000340958 GBA2Q9HCG7 927 aaPredicted RBP19.87■□□□□ 0.77
CLDN4-201ENST00000340958 PAPPA2Q9BXP8 1791 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms