RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 CCDC97Q96F63 343 aaPredicted RBP14.27□□□□□ -0.13
DNMT1-201ENST00000340748 NOX5Q96PH1 765 aa14.27□□□□□ -0.13
DNMT1-201ENST00000340748 MTMR6Q9Y217 621 aa14.27□□□□□ -0.13
DNMT1-201ENST00000340748 MED23Q9ULK4 1368 aa14.27□□□□□ -0.13
DNMT1-201ENST00000340748 NCAPD2Q15021 1401 aa14.27□□□□□ -0.13
DNMT1-201ENST00000340748 ARHGEF35A5YM69 484 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 SLC9C1Q4G0N8 1177 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 NCAPH2Q6IBW4 605 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
DNMT1-201ENST00000340748 CCDC51Q96ER9 411 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 EDC3Q96F86 508 aaKnown RBP14.26□□□□□ -0.13
DNMT1-201ENST00000340748 TRERF1Q96PN7 1200 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 PALD1Q9ULE6 856 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 SORBS3O60504 671 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 PCP11498 1178 aaKnown RBP14.26□□□□□ -0.13
DNMT1-201ENST00000340748 PDE6AP16499 860 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 CRKP46108 304 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 NOSTRINQ8IVI9 506 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 SPICE1Q8N0Z3 855 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 FAM76AQ8TAV0 307 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 NUCKS1Q9H1E3 243 aaKnown RBP14.26□□□□□ -0.13
DNMT1-201ENST00000340748 MST1RQ04912 1400 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 PTPRUQ92729 1446 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
DNMT1-201ENST00000340748 RNF169Q8NCN4 708 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 IFT74Q96LB3 600 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 VPS54Q9P1Q0 977 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 GPSM2P81274 684 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 REXO1Q8N1G1 1221 aaKnown RBP14.26□□□□□ -0.13
DNMT1-201ENST00000340748 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
DNMT1-201ENST00000340748 PAIP2Q9BPZ3 127 aaKnown RBP14.26□□□□□ -0.13
DNMT1-201ENST00000340748 SELENOSQ9BQE4 189 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 NT5C3AQ9H0P0 336 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 CSRNP2Q9H175 543 aa14.26□□□□□ -0.13
DNMT1-201ENST00000340748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.26□□□□□ -0.13
DNMT1-201ENST00000340748 UBE3CQ15386 1083 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 DHX36Q9H2U1 1008 aaKnown RBP14.25□□□□□ -0.13
DNMT1-201ENST00000340748 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 VEGFAP15692 232 aaPredicted RBP14.25□□□□□ -0.13
DNMT1-201ENST00000340748 STYK1Q6J9G0 422 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 KIAA1468Q9P260 1216 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 CCPG1Q9ULG6 757 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 TRPC6Q9Y210 931 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 KIDINS220Q9ULH0 1771 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 UNC13BO14795 1591 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 KDM3AQ9Y4C1 1321 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 TMEM232C9JQI7 657 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 PFKFB1P16118 471 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 GALNT17Q6IS24 598 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 CCDC84Q86UT8 332 aaPredicted RBP14.25□□□□□ -0.13
DNMT1-201ENST00000340748 MAP4K1Q92918 833 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 TDRD3Q9H7E2 651 aaKnown RBP14.25□□□□□ -0.13
DNMT1-201ENST00000340748 TSKSQ9UJT2 592 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 MAPK8IP1Q9UQF2 711 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 PABPN1LA6NDY0 278 aaKnown RBP14.25□□□□□ -0.13
DNMT1-201ENST00000340748 DDAH1O94760 285 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 CLUL1Q15846 466 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 SDR42E1Q8WUS8 393 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 SWAP70Q9UH65 585 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 SERTAD1Q9UHV2 236 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 ZHX2Q9Y6X8 837 aa14.25□□□□□ -0.13
DNMT1-201ENST00000340748 EBAG9O00559 213 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 GNA14O95837 355 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 KRT5P13647 590 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 SLFN13Q68D06 897 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 MCF2L2Q86YR7 1114 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 MYRIPQ8NFW9 859 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 ATP8A2Q9NTI2 1148 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.24□□□□□ -0.13
DNMT1-201ENST00000340748 TAB2Q9NYJ8 693 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 USP31Q70CQ4 1352 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 CMA1P23946 247 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 CCDC121Q6ZUS5 278 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 TRIML1Q8N9V2 468 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 MRPL11Q9Y3B7 192 aaKnown RBP14.24□□□□□ -0.13
DNMT1-201ENST00000340748 ATP10DQ9P241 1426 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 RIOK3O14730 519 aaKnown RBP14.24□□□□□ -0.13
DNMT1-201ENST00000340748 BIRC3Q13489 604 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 HERC4Q5GLZ8 1057 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-201ENST00000340748 PI4KBQ9UBF8 816 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 PNOCQ13519 176 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 LIN9Q5TKA1 542 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 C8orf74Q6P047 294 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 FANCBQ8NB91 859 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 PPM1EQ8WY54 764 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 CCDC17Q96LX7 622 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 CCDC169A6NNP5 214 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 HARSP12081 509 aaKnown RBP14.24□□□□□ -0.13
DNMT1-201ENST00000340748 ATP5DP30049 168 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 CACNB3P54284 484 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 STRN3Q13033 797 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 TAF1CQ15572 869 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-201ENST00000340748 UBL4BQ8N7F7 174 aa14.24□□□□□ -0.13
DNMT1-201ENST00000340748 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-201ENST00000340748 CELF1Q92879 486 aaKnown RBP14.24□□□□□ -0.13
DNMT1-201ENST00000340748 KRT9P35527 623 aa14.23□□□□□ -0.13
DNMT1-201ENST00000340748 FRMPD2Q68DX3 1309 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-201ENST00000340748 HACE1Q8IYU2 909 aa14.23□□□□□ -0.13
DNMT1-201ENST00000340748 BLIDQ8IZY5 108 aa14.23□□□□□ -0.13
DNMT1-201ENST00000340748 FBF1Q8TES7 1133 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms