RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 INTS4Q96HW7 963 aaKnown RBP20.77■□□□□ 0.91
SDCBP2-201ENST00000339987 UBA5Q9GZZ9 404 aa20.77■□□□□ 0.91
SDCBP2-201ENST00000339987 RIOX1Q9H6W3 641 aa20.77■□□□□ 0.91
SDCBP2-201ENST00000339987 SLC45A1Q9Y2W3 748 aa20.77■□□□□ 0.91
SDCBP2-201ENST00000339987 MYPNQ86TC9 1320 aa20.77■□□□□ 0.91
SDCBP2-201ENST00000339987 CNTNAP5Q8WYK1 1306 aa20.77■□□□□ 0.91
SDCBP2-201ENST00000339987 SLC16A2P36021 539 aa20.76■□□□□ 0.91
SDCBP2-201ENST00000339987 INHBEP58166 350 aa20.76■□□□□ 0.91
SDCBP2-201ENST00000339987 SYDE2Q5VT97 1194 aa20.76■□□□□ 0.91
SDCBP2-201ENST00000339987 PAXIP1Q6ZW49 1069 aaPredicted RBP20.76■□□□□ 0.91
SDCBP2-201ENST00000339987 ANKRD23Q86SG2 305 aa20.76■□□□□ 0.91
SDCBP2-201ENST00000339987 NBPF11Q86T75 865 aa20.76■□□□□ 0.91
SDCBP2-201ENST00000339987 CAPNS2Q96L46 248 aa20.76■□□□□ 0.91
SDCBP2-201ENST00000339987 SLF1Q9BQI6 1058 aa20.76■□□□□ 0.91
SDCBP2-201ENST00000339987 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.76■□□□□ 0.91
SDCBP2-201ENST00000339987 PARP14Q460N5 1801 aa20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 CYTH3O43739 400 aa20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 IKQ13123 557 aaPredicted RBP20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 NOGQ13253 232 aa20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 CMTR1Q8N1G2 835 aaKnown RBP20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 PRPF38AQ8NAV1 312 aaKnown RBP20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 MTMR8Q96EF0 704 aa20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 RNF26Q9BY78 433 aaPredicted RBP20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 CPVLQ9H3G5 476 aa20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 FBXO28Q9NVF7 368 aa20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 RBM27Q9P2N5 1060 aaKnown RBP20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 PPP1R9AQ9ULJ8 1098 aa20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 RLFQ13129 1914 aa20.75■□□□□ 0.91
SDCBP2-201ENST00000339987 STK36Q9NRP7 1315 aa20.74■□□□□ 0.91
SDCBP2-201ENST00000339987 BTBD19C9JJ37 291 aa20.74■□□□□ 0.91
SDCBP2-201ENST00000339987 FLOT1O75955 427 aa20.74■□□□□ 0.91
SDCBP2-201ENST00000339987 SREBF2Q12772 1141 aa20.74■□□□□ 0.91
SDCBP2-201ENST00000339987 COG2Q14746 738 aa20.74■□□□□ 0.91
SDCBP2-201ENST00000339987 ADGRF4Q8IZF3 695 aa20.74■□□□□ 0.91
SDCBP2-201ENST00000339987 SMARCC2Q8TAQ2 1214 aa20.74■□□□□ 0.91
SDCBP2-201ENST00000339987 JMJD4Q9H9V9 463 aa20.74■□□□□ 0.91
SDCBP2-201ENST00000339987 ZCCHC17Q9NP64 241 aaKnown RBP20.74■□□□□ 0.91
SDCBP2-201ENST00000339987 PRR12Q9ULL5 1215 aa20.74■□□□□ 0.91
SDCBP2-201ENST00000339987 PTPDC1A2A3K4 754 aa20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 PRPF3O43395 683 aaKnown RBP20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 FMNL1O95466 1100 aaPredicted RBP20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 FDX1P10109 184 aa20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 OSBPP22059 807 aa20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 DSG3P32926 999 aa20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 HMGN5P82970 282 aaKnown RBP20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 SSRP1Q08945 709 aaKnown RBP20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 TRIM22Q8IYM9 498 aa20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 CCDC82Q8N4S0 544 aa20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 PTPN18Q99952 460 aa20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 PNMA3Q9UL41 463 aa20.73■□□□□ 0.91
SDCBP2-201ENST00000339987 HSPA6P17066 643 aa20.72■□□□□ 0.91
SDCBP2-201ENST00000339987 IRX3P78415 501 aaPredicted RBP20.72■□□□□ 0.91
SDCBP2-201ENST00000339987 REM2Q8IYK8 340 aaPredicted RBP20.72■□□□□ 0.91
SDCBP2-201ENST00000339987 PHKBQ93100 1093 aa20.72■□□□□ 0.91
SDCBP2-201ENST00000339987 KIFC2Q96AC6 838 aa20.72■□□□□ 0.91
SDCBP2-201ENST00000339987 RRP36Q96EU6 259 aaKnown RBP20.72■□□□□ 0.91
SDCBP2-201ENST00000339987 SLC26A6Q9BXS9 759 aa20.72■□□□□ 0.91
SDCBP2-201ENST00000339987 ASCC2Q9H1I8 757 aaPredicted RBP20.72■□□□□ 0.91
SDCBP2-201ENST00000339987 HOXC10Q9NYD6 342 aa20.72■□□□□ 0.91
SDCBP2-201ENST00000339987 ADAMTS5Q9UNA0 930 aa20.72■□□□□ 0.91
SDCBP2-201ENST00000339987 PDHXO00330 501 aa20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 JAK2O60674 1132 aa20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 TM4SF4P48230 202 aa20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 AKAP17AQ02040 695 aaKnown RBP20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 KIF23Q02241 960 aaPredicted RBP20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 LBX2Q6XYB7 198 aa20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 FAM43AQ8N2R8 423 aa20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 RANBP17Q9H2T7 1088 aaKnown RBP20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 VAT1LQ9HCJ6 419 aa20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 SMC3Q9UQE7 1217 aa20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 V9GY48 417 aaPredicted RBP20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 WDR33Q9C0J8 1336 aaKnown RBP20.71■□□□□ 0.91
SDCBP2-201ENST00000339987 SPDYE16A6NNV3 312 aaPredicted RBP20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 DEXIO95424 95 aa20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 HSP90AA1P07900 732 aaKnown RBP20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 GRM1Q13255 1194 aa20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 ATG4CQ96DT6 458 aa20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 PIGSQ96S52 555 aa20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 ORC3Q9UBD5 711 aaPredicted RBP20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 BAZ2BQ9UIF8 2168 aaKnown RBP20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 IGF2BP3O00425 579 aaKnown RBP eCLIP20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 ZBTB5O15062 677 aa20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 FDPSP14324 419 aaKnown RBP20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 CDC37Q16543 378 aaPredicted RBP20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 OTUD7BQ6GQQ9 843 aa20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 IFNL1Q8IU54 200 aa20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 GTF3C2Q8WUA4 911 aaPredicted RBP20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 ZIC5Q96T25 663 aa20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 P2RX7Q99572 595 aaKnown RBP20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 SLC38A10Q9HBR0 1119 aa20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 SEC63Q9UGP8 760 aaKnown RBP20.7■□□□□ 0.9
SDCBP2-201ENST00000339987 A0A0G2JMZ2 1700 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 THSD7BQ9C0I4 1608 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 PNMA6FA0A0J9YX94 578 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 VWA5AO00534 786 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 ZBED4O75132 1171 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 MAP2K2P36507 400 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 VEGFBP49765 207 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 HERVK_113P62684 666 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 HTRA3P83110 453 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms