RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 CADPS2Q86UW7 1296 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 FAM205AQ6ZU69 1335 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 AKAP11Q9UKA4 1901 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 TULP1O00294 542 aaPredicted RBP18.1■□□□□ 0.49
SCARB1-202ENST00000339570 HERVK_113P62684 666 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 WHAMMP3Q1A5X7 153 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 TYW1BQ6NUM6 668 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 LRRC31Q6UY01 552 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 SH3RF1Q7Z6J0 888 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 CSGALNACT2Q8N6G5 542 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 MSANTD4Q8NCY6 345 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 HDAC7Q8WUI4 952 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 TMEM60Q9H2L4 133 aa18.1■□□□□ 0.49
SCARB1-202ENST00000339570 POTEB2H3BUK9 544 aa18.09■□□□□ 0.49
SCARB1-202ENST00000339570 PDE2AO00408 941 aaPredicted RBP18.09■□□□□ 0.49
SCARB1-202ENST00000339570 AFAP1L1Q8TED9 768 aa18.09■□□□□ 0.49
SCARB1-202ENST00000339570 DYNLL2Q96FJ2 89 aa18.09■□□□□ 0.49
SCARB1-202ENST00000339570 MLXIPQ9HAP2 919 aa18.09■□□□□ 0.49
SCARB1-202ENST00000339570 STX8Q9UNK0 236 aa18.09■□□□□ 0.49
SCARB1-202ENST00000339570 RTL9Q8NET4 1388 aa18.09■□□□□ 0.49
SCARB1-202ENST00000339570 CCDC194A0A1B0GVG4 234 aa18.09■□□□□ 0.49
SCARB1-202ENST00000339570 GNAT2P19087 354 aa18.09■□□□□ 0.49
SCARB1-202ENST00000339570 STIM1Q13586 685 aa18.09■□□□□ 0.49
SCARB1-202ENST00000339570 TNS3Q68CZ2 1445 aa18.08■□□□□ 0.49
SCARB1-202ENST00000339570 TROAPQ12815 778 aa18.08■□□□□ 0.49
SCARB1-202ENST00000339570 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.499e-10■■■■□ 25.5
SCARB1-202ENST00000339570 SLC51AQ86UW1 340 aa18.08■□□□□ 0.49
SCARB1-202ENST00000339570 MB21D1Q8N884 522 aa18.08■□□□□ 0.49
SCARB1-202ENST00000339570 RRP36Q96EU6 259 aaKnown RBP18.08■□□□□ 0.49
SCARB1-202ENST00000339570 LRWD1Q9UFC0 647 aa18.08■□□□□ 0.49
SCARB1-202ENST00000339570 RWDD2AQ9UIY3 292 aa18.08■□□□□ 0.49
SCARB1-202ENST00000339570 NCK2O43639 380 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 GTPBP6O43824 516 aaPredicted RBP18.08■□□□□ 0.48
SCARB1-202ENST00000339570 FCER1AP12319 257 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 SCG2P13521 617 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 IBSPP21815 317 aaPredicted RBP18.08■□□□□ 0.48
SCARB1-202ENST00000339570 ATP2C1P98194 919 aaPredicted RBP18.08■□□□□ 0.48
SCARB1-202ENST00000339570 MUM1L1Q5H9M0 696 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 PDXDC2PQ6P474 469 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 BRINP3Q76B58 766 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 IRF2BP1Q8IU81 584 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 GBP3Q9H0R5 595 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 DEF6Q9H4E7 631 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 ZNHIT6Q9NWK9 470 aaKnown RBP18.08■□□□□ 0.48
SCARB1-202ENST00000339570 RAB21Q9UL25 225 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 PRPF3O43395 683 aaKnown RBP18.08■□□□□ 0.48
SCARB1-202ENST00000339570 KCTD16Q68DU8 428 aa18.08■□□□□ 0.48
SCARB1-202ENST00000339570 MYH2Q9UKX2 1941 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 ASIC1P78348 528 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 NPY5RQ15761 445 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 ZNF658Q5TYW1 1059 aaPredicted RBP18.07■□□□□ 0.48
SCARB1-202ENST00000339570 TMTC3Q6ZXV5 915 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 ACBD3Q9H3P7 528 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 MMRN2Q9H8L6 949 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 MCM9Q9NXL9 1143 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 SAMM50Q9Y512 469 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 CDHR2Q9BYE9 1310 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 EIF3CLB5ME19 914 aaKnown RBP18.07■□□□□ 0.48
SCARB1-202ENST00000339570 USP17L8P0C7I0 530 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 ARID5AQ03989 594 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 LETM2Q2VYF4 491 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 C3orf67Q6ZVT6 689 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 EIF3CQ99613 913 aaKnown RBP18.07■□□□□ 0.48
SCARB1-202ENST00000339570 TUBGCP2Q9BSJ2 902 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 KANSL2Q9H9L4 492 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 LIMA1Q9UHB6 759 aaKnown RBP18.07■□□□□ 0.48
SCARB1-202ENST00000339570 KCPQ6ZWJ8 1503 aa18.07■□□□□ 0.48
SCARB1-202ENST00000339570 KIF1AQ12756 1690 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 BUB1O43683 1085 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 CCT5P48643 541 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 FUT2Q10981 343 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 E2F4Q16254 413 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 CCDC152Q4G0S7 254 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 WDR59Q6PJI9 974 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 DTHD1Q6ZMT9 781 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 DYMQ7RTS9 669 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 TMC4Q7Z404 712 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 TICAM2Q86XR7 235 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 MICALL1Q8N3F8 863 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 CARD10Q9BWT7 1032 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 SLC39A2Q9NP94 309 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 USP17L3A6NCW0 530 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 USP17L4A6NCW7 530 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 MOCS3O95396 460 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 PRDX5P30044 214 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 ATP6V1AP38606 617 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 PDE4DQ08499 809 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 USP17L1Q7RTZ2 530 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 SLC44A5Q8NCS7 719 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 FAM71BQ8TC56 605 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 TANGO6Q9C0B7 1094 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 NHEJ1Q9H9Q4 299 aaPredicted RBP18.06■□□□□ 0.48
SCARB1-202ENST00000339570 CAMTA1Q9Y6Y1 1673 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 USP14P54578 494 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 C2CD5Q86YS7 1000 aa18.06■□□□□ 0.48
SCARB1-202ENST00000339570 SYF2O95926 243 aaKnown RBP18.05■□□□□ 0.48
SCARB1-202ENST00000339570 LIG3P49916 1009 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 ATP1A2P50993 1020 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 AMPD2Q01433 879 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 SPAG1Q07617 926 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms