RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 MCM3P25205 808 aa26.52■■□□□ 1.84
TSKU-201ENST00000333090 KIAA1328Q86T90 577 aa26.52■■□□□ 1.84
TSKU-201ENST00000333090 RBM28Q9NW13 759 aaKnown RBP26.52■■□□□ 1.84
TSKU-201ENST00000333090 H7C1D1 291 aa26.52■■□□□ 1.84
TSKU-201ENST00000333090 TROAPQ12815 778 aa26.52■■□□□ 1.84
TSKU-201ENST00000333090 GSPT2Q8IYD1 628 aaKnown RBP26.52■■□□□ 1.84
TSKU-201ENST00000333090 DNAJC7Q99615 494 aa26.52■■□□□ 1.84
TSKU-201ENST00000333090 WDR59Q6PJI9 974 aa26.51■■□□□ 1.83
TSKU-201ENST00000333090 PYM1Q9BRP8 204 aaKnown RBP26.51■■□□□ 1.83
TSKU-201ENST00000333090 DOCK2Q92608 1830 aa26.51■■□□□ 1.83
TSKU-201ENST00000333090 PRPF6O94906 941 aaKnown RBP26.51■■□□□ 1.83
TSKU-201ENST00000333090 NLRP5P59047 1200 aa26.51■■□□□ 1.83
TSKU-201ENST00000333090 STIM1Q13586 685 aa26.51■■□□□ 1.83
TSKU-201ENST00000333090 IQCA1Q86XH1 822 aa26.51■■□□□ 1.83
TSKU-201ENST00000333090 CAGE1Q8TC20 777 aa26.51■■□□□ 1.83
TSKU-201ENST00000333090 COG1Q8WTW3 980 aa26.51■■□□□ 1.83
TSKU-201ENST00000333090 JAKMIP2Q96AA8 810 aa26.51■■□□□ 1.83
TSKU-201ENST00000333090 GNL3LQ9NVN8 582 aaKnown RBP26.51■■□□□ 1.83
TSKU-201ENST00000333090 LGALS16A8MUM7 142 aa26.5■■□□□ 1.83
TSKU-201ENST00000333090 CYP19A1P11511 503 aaPredicted RBP26.5■■□□□ 1.83
TSKU-201ENST00000333090 MAGEA9P43362 315 aa26.5■■□□□ 1.83
TSKU-201ENST00000333090 PAPD7Q5XG87 772 aaKnown RBP26.5■■□□□ 1.83
TSKU-201ENST00000333090 EFCC1Q9HA90 598 aa26.5■■□□□ 1.83
TSKU-201ENST00000333090 MAGEB6P1A0A0J9YX57 407 aa26.5■■□□□ 1.83
TSKU-201ENST00000333090 STAT6P42226 847 aa26.5■■□□□ 1.83
TSKU-201ENST00000333090 PMS1P54277 932 aaKnown RBP26.5■■□□□ 1.83
TSKU-201ENST00000333090 TMTC3Q6ZXV5 915 aa26.5■■□□□ 1.83
TSKU-201ENST00000333090 CTR9Q6PD62 1173 aa26.49■■□□□ 1.83
TSKU-201ENST00000333090 SMARCC1Q92922 1105 aaPredicted RBP26.49■■□□□ 1.83
TSKU-201ENST00000333090 KRT86O43790 486 aa26.49■■□□□ 1.83
TSKU-201ENST00000333090 NOP2P46087 812 aaKnown RBP26.49■■□□□ 1.83
TSKU-201ENST00000333090 CRACR2AQ9BSW2 395 aa26.49■■□□□ 1.83
TSKU-201ENST00000333090 ANAPC4Q9UJX5 808 aa26.49■■□□□ 1.83
TSKU-201ENST00000333090 MYH2Q9UKX2 1941 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 GGCXP38435 758 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 KRT83P78385 493 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 CAPN11Q9UMQ6 739 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 CNTNAP5Q8WYK1 1306 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 ADAMTS3O15072 1205 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 ZNF185O15231 689 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 PPFIA4O75335 1185 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 CKAP4Q07065 602 aaKnown RBP26.48■■□□□ 1.83
TSKU-201ENST00000333090 DZIP3Q86Y13 1208 aaKnown RBP26.48■■□□□ 1.83
TSKU-201ENST00000333090 ADSSL1Q8N142 457 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 SRBD1Q8N5C6 995 aaKnown RBP26.48■■□□□ 1.83
TSKU-201ENST00000333090 EEF2KMTQ96G04 330 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 LACRTQ9GZZ8 138 aa26.48■■□□□ 1.83
TSKU-201ENST00000333090 ZC3H4Q9UPT8 1303 aaKnown RBP26.47■■□□□ 1.83
TSKU-201ENST00000333090 MYBL2P10244 700 aa26.47■■□□□ 1.83
TSKU-201ENST00000333090 EHBP1Q8NDI1 1231 aa26.47■■□□□ 1.83
TSKU-201ENST00000333090 RASSF8Q8NHQ8 419 aa26.47■■□□□ 1.83
TSKU-201ENST00000333090 ACSBG1Q96GR2 724 aa26.47■■□□□ 1.83
TSKU-201ENST00000333090 TRIM47Q96LD4 638 aa26.47■■□□□ 1.83
TSKU-201ENST00000333090 A0A1W2PQC6 194 aa26.47■■□□□ 1.83
TSKU-201ENST00000333090 TARSL2A2RTX5 802 aaKnown RBP26.47■■□□□ 1.83
TSKU-201ENST00000333090 VEGFAP15692 232 aaPredicted RBP26.47■■□□□ 1.83
TSKU-201ENST00000333090 HINFPQ9BQA5 517 aa26.47■■□□□ 1.83
TSKU-201ENST00000333090 AGPAT5Q9NUQ2 364 aa26.47■■□□□ 1.83
TSKU-201ENST00000333090 BCORQ6W2J9 1755 aa26.47■■□□□ 1.83
TSKU-201ENST00000333090 CALM1P0DP23 149 aa26.46■■□□□ 1.83
TSKU-201ENST00000333090 CALM2P0DP24 149 aa26.46■■□□□ 1.83
TSKU-201ENST00000333090 CALM3P0DP25 149 aa26.46■■□□□ 1.83
TSKU-201ENST00000333090 ZNF507Q8TCN5 953 aa26.46■■□□□ 1.83
TSKU-201ENST00000333090 RPGRIP1Q96KN7 1286 aa26.46■■□□□ 1.83
TSKU-201ENST00000333090 RCCD1A6NED2 376 aa26.46■■□□□ 1.83
TSKU-201ENST00000333090 IPO7O95373 1038 aaKnown RBP26.46■■□□□ 1.83
TSKU-201ENST00000333090 EIF5P55010 431 aaKnown RBP26.46■■□□□ 1.83
TSKU-201ENST00000333090 CORO7P57737 925 aa26.46■■□□□ 1.83
TSKU-201ENST00000333090 TTC31Q49AM3 519 aaPredicted RBP26.46■■□□□ 1.83
TSKU-201ENST00000333090 SELENOOQ9BVL4 669 aa26.46■■□□□ 1.83
TSKU-201ENST00000333090 JADE2Q9NQC1 790 aa26.46■■□□□ 1.83
TSKU-201ENST00000333090 B4DLN1 442 aa26.45■■□□□ 1.83
TSKU-201ENST00000333090 TRIM21P19474 475 aaKnown RBP26.45■■□□□ 1.83
TSKU-201ENST00000333090 TRAPPC10P48553 1259 aa26.45■■□□□ 1.83
TSKU-201ENST00000333090 PACS2Q86VP3 889 aa26.45■■□□□ 1.83
TSKU-201ENST00000333090 MAGEC2Q9UBF1 373 aaPredicted RBP26.45■■□□□ 1.83
TSKU-201ENST00000333090 DUSP10Q9Y6W6 482 aa26.45■■□□□ 1.83
TSKU-201ENST00000333090 MACROD2A1Z1Q3 448 aa26.45■■□□□ 1.82
TSKU-201ENST00000333090 PDE2AO00408 941 aaPredicted RBP26.45■■□□□ 1.82
TSKU-201ENST00000333090 SCG2P13521 617 aa26.45■■□□□ 1.82
TSKU-201ENST00000333090 EEF1GP26641 437 aaKnown RBP26.45■■□□□ 1.82
TSKU-201ENST00000333090 DISP2A7MBM2 1401 aa26.45■■□□□ 1.82
TSKU-201ENST00000333090 PDS5AQ29RF7 1337 aaKnown RBP26.45■■□□□ 1.82
TSKU-201ENST00000333090 CYLC1P35663 651 aaPredicted RBP26.45■■□□□ 1.82
TSKU-201ENST00000333090 ARAP2Q8WZ64 1704 aa26.44■■□□□ 1.82
TSKU-201ENST00000333090 NMT2O60551 498 aa26.44■■□□□ 1.82
TSKU-201ENST00000333090 IDEP14735 1019 aa26.44■■□□□ 1.82
TSKU-201ENST00000333090 DYNLL1P63167 89 aaKnown RBP26.44■■□□□ 1.82
TSKU-201ENST00000333090 ZNHIT6Q9NWK9 470 aaKnown RBP26.44■■□□□ 1.82
TSKU-201ENST00000333090 DDAH1O94760 285 aa26.44■■□□□ 1.82
TSKU-201ENST00000333090 LONP1P36776 959 aaKnown RBP26.44■■□□□ 1.82
TSKU-201ENST00000333090 C2orf54Q08AI8 447 aa26.44■■□□□ 1.82
TSKU-201ENST00000333090 PLIN2Q99541 437 aa26.44■■□□□ 1.82
TSKU-201ENST00000333090 DISC1Q9NRI5 854 aa26.44■■□□□ 1.82
TSKU-201ENST00000333090 MYH13Q9UKX3 1938 aa26.43■■□□□ 1.82
TSKU-201ENST00000333090 CYP27A1Q02318 531 aa26.43■■□□□ 1.82
TSKU-201ENST00000333090 CCNI2Q6ZMN8 369 aaPredicted RBP26.43■■□□□ 1.82
TSKU-201ENST00000333090 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.43■■□□□ 1.82
TSKU-201ENST00000333090 NHEJ1Q9H9Q4 299 aaPredicted RBP26.43■■□□□ 1.82
TSKU-201ENST00000333090 LRP5O75197 1615 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms