RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 SCNN1DP51172 638 aa24.67■■□□□ 1.54
SPHK1-201ENST00000323374 HOMER1Q86YM7 354 aa24.67■■□□□ 1.54
SPHK1-201ENST00000323374 VSTM4Q8IW00 320 aa24.67■■□□□ 1.54
SPHK1-201ENST00000323374 C6orf50Q9HD87 102 aa24.67■■□□□ 1.54
SPHK1-201ENST00000323374 SERPINB13Q9UIV8 391 aa24.67■■□□□ 1.54
SPHK1-201ENST00000323374 USP17L5A8MUK1 530 aa24.67■■□□□ 1.54
SPHK1-201ENST00000323374 TNNT1P13805 278 aa24.67■■□□□ 1.54
SPHK1-201ENST00000323374 DTHD1Q6ZMT9 781 aa24.67■■□□□ 1.54
SPHK1-201ENST00000323374 PODNQ7Z5L7 613 aa24.67■■□□□ 1.54
SPHK1-201ENST00000323374 TRMT44Q8IYL2 757 aaKnown RBP24.67■■□□□ 1.54
SPHK1-201ENST00000323374 KCND1Q9NSA2 647 aa24.67■■□□□ 1.54
SPHK1-201ENST00000323374 COL11A2P13942 1736 aaPredicted RBP24.66■■□□□ 1.54
SPHK1-201ENST00000323374 LAD1O00515 517 aa24.66■■□□□ 1.54
SPHK1-201ENST00000323374 CASP1P29466 404 aa24.66■■□□□ 1.54
SPHK1-201ENST00000323374 GTF2F1P35269 517 aaKnown RBP eCLIP24.66■■□□□ 1.54
SPHK1-201ENST00000323374 MSL1Q68DK7 614 aa24.66■■□□□ 1.54
SPHK1-201ENST00000323374 PDXDC2PQ6P474 469 aa24.66■■□□□ 1.54
SPHK1-201ENST00000323374 SMCO2A6NFE2 343 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 PDHBP11177 359 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 AKR1B1P15121 316 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 SOGA3Q5TF21 947 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 CDC42EP5Q6NZY7 148 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 KRT25Q7Z3Z0 450 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 VAT1LQ9HCJ6 419 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 MYO3BQ8WXR4 1341 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 IGKV6D-41A0A0C4DH26 115 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 MED15Q96RN5 788 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 PIGSQ96S52 555 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 RIOX1Q9H6W3 641 aa24.65■■□□□ 1.54
SPHK1-201ENST00000323374 ASPRV1Q53RT3 343 aa24.64■■□□□ 1.54
SPHK1-201ENST00000323374 APOBEC3HQ6NTF7 200 aaKnown RBP24.64■■□□□ 1.54
SPHK1-201ENST00000323374 C2CD5Q86YS7 1000 aa24.64■■□□□ 1.54
SPHK1-201ENST00000323374 hCG_1984214I3L0E3 225 aa24.64■■□□□ 1.53
SPHK1-201ENST00000323374 GTPBP6O43824 516 aaPredicted RBP24.64■■□□□ 1.53
SPHK1-201ENST00000323374 HLA-DOAP06340 250 aa24.64■■□□□ 1.53
SPHK1-201ENST00000323374 HSP90AA4PQ58FG1 418 aa24.64■■□□□ 1.53
SPHK1-201ENST00000323374 CCAR2Q8N163 923 aaKnown RBP24.64■■□□□ 1.53
SPHK1-201ENST00000323374 ZNF713Q8N859 430 aaPredicted RBP24.64■■□□□ 1.53
SPHK1-201ENST00000323374 STAMQ92783 540 aa24.64■■□□□ 1.53
SPHK1-201ENST00000323374 UBA5Q9GZZ9 404 aa24.64■■□□□ 1.53
SPHK1-201ENST00000323374 USP27XA6NNY8 438 aa24.63■■□□□ 1.53
SPHK1-201ENST00000323374 TTLL1O95922 423 aa24.63■■□□□ 1.53
SPHK1-201ENST00000323374 NONOQ15233 471 aaKnown RBP eCLIP24.63■■□□□ 1.53
SPHK1-201ENST00000323374 AEBP2Q6ZN18 517 aaPredicted RBP24.63■■□□□ 1.53
SPHK1-201ENST00000323374 TMEM60Q9H2L4 133 aa24.63■■□□□ 1.53
SPHK1-201ENST00000323374 DBNDD1Q9H9R9 158 aa24.63■■□□□ 1.53
SPHK1-201ENST00000323374 TMEM232C9JQI7 657 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 PRPHP41219 470 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 KCNJ6P48051 423 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 CUL4BQ13620 913 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 SPATA1Q5VX52 437 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 SAMSN1Q9NSI8 373 aaKnown RBP24.62■■□□□ 1.53
SPHK1-201ENST00000323374 INTS13Q9NVM9 706 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 FRMPD2Q68DX3 1309 aaPredicted RBP24.62■■□□□ 1.53
SPHK1-201ENST00000323374 H0YIN7 160 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 SNHG28P0DPA3 235 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 CD44P16070 742 aaKnown RBP24.62■■□□□ 1.53
SPHK1-201ENST00000323374 CRKP46108 304 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 STYK1Q6J9G0 422 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 LRRC47Q8N1G4 583 aaKnown RBP24.62■■□□□ 1.53
SPHK1-201ENST00000323374 BLZF1Q9H2G9 400 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 DISC1Q9NRI5 854 aa24.62■■□□□ 1.53
SPHK1-201ENST00000323374 SYNRGQ9UMZ2 1314 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 ESYT2A0FGR8 921 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 RIOK3O14730 519 aaKnown RBP24.61■■□□□ 1.53
SPHK1-201ENST00000323374 SHMT1P34896 483 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 STAT6P42226 847 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 PTPN14Q15678 1187 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 KLHL10Q6JEL2 608 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 CCDC112Q8NEF3 446 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 MTRQ99707 1265 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 PAXBP1Q9Y5B6 917 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 PPP1R3GB7ZBB8 358 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 CDC25AP30304 524 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 EIF6P56537 245 aaKnown RBP24.61■■□□□ 1.53
SPHK1-201ENST00000323374 KARSQ15046 597 aaKnown RBP24.61■■□□□ 1.53
SPHK1-201ENST00000323374 NYAP1Q6ZVC0 841 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 ZDHHC15Q96MV8 337 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 MRIQ9BWK5 157 aa24.61■■□□□ 1.53
SPHK1-201ENST00000323374 TRMT1Q9NXH9 659 aaKnown RBP24.61■■□□□ 1.53
SPHK1-201ENST00000323374 CEP135Q66GS9 1140 aa24.6■■□□□ 1.53
SPHK1-201ENST00000323374 RMND1Q9NWS8 449 aa24.6■■□□□ 1.53
SPHK1-201ENST00000323374 C10orf71Q711Q0 1435 aa24.6■■□□□ 1.53
SPHK1-201ENST00000323374 UBA7P41226 1012 aa24.59■■□□□ 1.53
SPHK1-201ENST00000323374 FKBP1AP62942 108 aaKnown RBP24.59■■□□□ 1.53
SPHK1-201ENST00000323374 LETM2Q2VYF4 491 aa24.59■■□□□ 1.53
SPHK1-201ENST00000323374 STRIP1Q5VSL9 837 aa24.59■■□□□ 1.53
SPHK1-201ENST00000323374 NEK8Q86SG6 692 aa24.59■■□□□ 1.53
SPHK1-201ENST00000323374 CCSER1Q9C0I3 900 aa24.59■■□□□ 1.53
SPHK1-201ENST00000323374 KCNQ5Q9NR82 932 aa24.59■■□□□ 1.53
SPHK1-201ENST00000323374 CCNT1O60563 726 aaKnown RBP24.59■■□□□ 1.53
SPHK1-201ENST00000323374 NFIAQ12857 509 aa24.59■■□□□ 1.53
SPHK1-201ENST00000323374 SMYD4Q8IYR2 804 aaPredicted RBP24.59■■□□□ 1.53
SPHK1-201ENST00000323374 REXO1Q8N1G1 1221 aaKnown RBP24.59■■□□□ 1.53
SPHK1-201ENST00000323374 RASSF8Q8NHQ8 419 aa24.59■■□□□ 1.53
SPHK1-201ENST00000323374 EHD4Q9H223 541 aa24.59■■□□□ 1.53
SPHK1-201ENST00000323374 PSDA5PKW4 1024 aaPredicted RBP24.58■■□□□ 1.53
SPHK1-201ENST00000323374 STX17P56962 302 aa24.58■■□□□ 1.53
SPHK1-201ENST00000323374 RRAGBQ5VZM2 374 aa24.58■■□□□ 1.53
SPHK1-201ENST00000323374 E4F1Q66K89 784 aaPredicted RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms