RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CCDC121Q6ZUS5 278 aa17.02■□□□□ 0.32
VARS2-201ENST00000321897 SRGAP1Q7Z6B7 1085 aa17.02■□□□□ 0.32
VARS2-201ENST00000321897 DHX40Q8IX18 779 aaKnown RBP17.02■□□□□ 0.32
VARS2-201ENST00000321897 EIF3CQ99613 913 aaKnown RBP17.02■□□□□ 0.32
VARS2-201ENST00000321897 SUGCTQ9HAC7 445 aa17.02■□□□□ 0.32
VARS2-201ENST00000321897 LRWD1Q9UFC0 647 aa17.02■□□□□ 0.32
VARS2-201ENST00000321897 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.32
VARS2-201ENST00000321897 MTF1Q14872 753 aa17.02■□□□□ 0.31
VARS2-201ENST00000321897 IQCB1Q15051 598 aa17.02■□□□□ 0.31
VARS2-201ENST00000321897 LRRC41Q15345 812 aa17.02■□□□□ 0.31
VARS2-201ENST00000321897 TOGARAM2Q6ZUX3 1019 aa17.02■□□□□ 0.31
VARS2-201ENST00000321897 DIP2AQ14689 1571 aa17.02■□□□□ 0.31
VARS2-201ENST00000321897 GNA11P29992 359 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 TBC1D10BQ4KMP7 808 aaPredicted RBP17.01■□□□□ 0.31
VARS2-201ENST00000321897 CFAP58Q5T655 872 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 TYW1BQ6NUM6 668 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 TLDC2A0PJX2 215 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 TEX33O43247 280 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 OPA1O60313 960 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 RBL2Q08999 1139 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 NCAPH2Q6IBW4 605 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 CABP7Q86V35 215 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 ALS2CR12Q96Q35 445 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 ZNF804BA4D1E1 1349 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 TOM1O60784 492 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 FAM196AQ6ZSG2 479 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 SYCP3Q8IZU3 236 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 CCDC151A5D8V7 595 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 FAM196BA6NMK8 535 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 PLA2G4AP47712 749 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 CACNB3P54284 484 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 COA7Q96BR5 231 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 GGA1Q9UJY5 639 aa17.01■□□□□ 0.31
VARS2-201ENST00000321897 KCNJ18B7U540 433 aa17■□□□□ 0.31
VARS2-201ENST00000321897 KCNJ12Q14500 433 aa17■□□□□ 0.31
VARS2-201ENST00000321897 SLF2Q8IX21 1173 aa17■□□□□ 0.31
VARS2-201ENST00000321897 CDC23Q9UJX2 597 aa17■□□□□ 0.31
VARS2-201ENST00000321897 C1orf167Q5SNV9 1468 aa17■□□□□ 0.31
VARS2-201ENST00000321897 TRIM49BA6NDI0 452 aa17■□□□□ 0.31
VARS2-201ENST00000321897 MAP2K1Q02750 393 aaPredicted RBP17■□□□□ 0.31
VARS2-201ENST00000321897 MORC3Q14149 939 aa17■□□□□ 0.31
VARS2-201ENST00000321897 CASP8Q14790 479 aa17■□□□□ 0.31
VARS2-201ENST00000321897 ENAHQ8N8S7 591 aaPredicted RBP17■□□□□ 0.31
VARS2-201ENST00000321897 DDX39AO00148 427 aaKnown RBP17■□□□□ 0.31
VARS2-201ENST00000321897 HERC4Q5GLZ8 1057 aaPredicted RBP17■□□□□ 0.31
VARS2-201ENST00000321897 SARM1Q6SZW1 724 aa17■□□□□ 0.31
VARS2-201ENST00000321897 RDH13Q8NBN7 331 aa17■□□□□ 0.31
VARS2-201ENST00000321897 FUCA2Q9BTY2 467 aa17■□□□□ 0.31
VARS2-201ENST00000321897 EPB41L3Q9Y2J2 1087 aaPredicted RBP17■□□□□ 0.31
VARS2-201ENST00000321897 PHLPP2Q6ZVD8 1323 aa17■□□□□ 0.31
VARS2-201ENST00000321897 EZRP15311 586 aaKnown RBP16.99■□□□□ 0.31
VARS2-201ENST00000321897 BTDP43251 543 aa16.99■□□□□ 0.31
VARS2-201ENST00000321897 CYP27A1Q02318 531 aa16.99■□□□□ 0.31
VARS2-201ENST00000321897 NONOQ15233 471 aaKnown RBP eCLIP16.99■□□□□ 0.31
VARS2-201ENST00000321897 SV2BQ7L1I2 683 aa16.99■□□□□ 0.31
VARS2-201ENST00000321897 GSPT2Q8IYD1 628 aaKnown RBP16.99■□□□□ 0.31
VARS2-201ENST00000321897 C2CD5Q86YS7 1000 aa16.99■□□□□ 0.31
VARS2-201ENST00000321897 EPB41L4AQ9HCS5 686 aaPredicted RBP16.99■□□□□ 0.31
VARS2-201ENST00000321897 TACC1O75410 805 aa16.99■□□□□ 0.31
VARS2-201ENST00000321897 SPICE1Q8N0Z3 855 aa16.99■□□□□ 0.31
VARS2-201ENST00000321897 JPH2Q9BR39 696 aaPredicted RBP16.99■□□□□ 0.31
VARS2-201ENST00000321897 PPANQ9NQ55 473 aaKnown RBP16.99■□□□□ 0.31
VARS2-201ENST00000321897 TTF2Q9UNY4 1162 aaKnown RBP16.99■□□□□ 0.31
VARS2-201ENST00000321897 SIGLEC1Q9BZZ2 1709 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 TADA3O75528 432 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 WDR78Q5VTH9 848 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 CLEC10AQ8IUN9 316 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 MROH7-TTC4A0A0A0MT08 1334 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 VAV2P52735 878 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 SNAP25P60880 206 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 TSGA10IPQ3SY00 556 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
VARS2-201ENST00000321897 CPLX4Q7Z7G2 160 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 REXO1Q8N1G1 1221 aaKnown RBP16.98■□□□□ 0.31
VARS2-201ENST00000321897 FBXO3Q9UK99 471 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 B4DLN1 442 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 CLNS1AP54105 237 aaKnown RBP16.98■□□□□ 0.31
VARS2-201ENST00000321897 CYP4A11Q02928 519 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 CUL5Q93034 780 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 FERMT2Q96AC1 680 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 EFCC1Q9HA90 598 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 HPS5Q9UPZ3 1129 aa16.98■□□□□ 0.31
VARS2-201ENST00000321897 GOLGA6L10A0A0M3HER8 536 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 TMEM110-MUSTN1A8MSY1 372 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 TBCAO75347 108 aaKnown RBP16.97■□□□□ 0.31
VARS2-201ENST00000321897 GUCY2FP51841 1108 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 RRAGAQ7L523 313 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 FAM114A1Q8IWE2 563 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 WDR66Q8TBY9 1149 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 MYO6Q9UM54 1294 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 TECPR2O15040 1411 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 PPP6R2O75170 966 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 SRLQ86TD4 932 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 METTL16Q86W50 562 aaKnown RBP16.97■□□□□ 0.31
VARS2-201ENST00000321897 MINPP1Q9UNW1 487 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 RIMS1Q86UR5 1692 aaKnown RBP16.97■□□□□ 0.31
VARS2-201ENST00000321897 STX10O60499 249 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 KLRK1P26718 216 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 CUL4BQ13620 913 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 EHBP1Q8NDI1 1231 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms