RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 KCNJ12Q14500 433 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 FAM182BQ5T319 152 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 HEATR3Q7Z4Q2 680 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 SAP30BPQ9UHR5 308 aaKnown RBP17.07■□□□□ 0.32
CSDC2-201ENST00000306149 RWDD2AQ9UIY3 292 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 STX8Q9UNK0 236 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 RREB1Q92766 1687 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 LAMB1P07942 1786 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 CASZ1Q86V15 1759 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 ERICH4A6NGS2 130 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 KIF5CO60282 957 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 TRAPPC10P48553 1259 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 PMS1P54277 932 aaKnown RBP17.06■□□□□ 0.32
CSDC2-201ENST00000306149 SBK1Q52WX2 424 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 TCP11X2Q5H9J9 407 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 CYTH3O43739 400 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 TBC1D8O95759 1140 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 ZNF658Q5TYW1 1059 aaPredicted RBP17.06■□□□□ 0.32
CSDC2-201ENST00000306149 C12orf60Q5U649 245 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 CNGA4Q8IV77 575 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 GOLGA1Q92805 767 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 ZCCHC17Q9NP64 241 aaKnown RBP17.06■□□□□ 0.32
CSDC2-201ENST00000306149 ANKIB1Q9P2G1 1089 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 LIMA1Q9UHB6 759 aaKnown RBP17.06■□□□□ 0.32
CSDC2-201ENST00000306149 PCDHA4Q9UN74 947 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 CCDC194A0A1B0GVG4 234 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 GNPATO15228 680 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 NAALADL2Q58DX5 795 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 TGFBRAP1Q8WUH2 860 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 SLF1Q9BQI6 1058 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 ABHD10Q9NUJ1 306 aa17.06■□□□□ 0.32
CSDC2-201ENST00000306149 KRT9P35527 623 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 UBXN1Q04323 297 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 KIF4BQ2VIQ3 1234 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 WWC2Q6AWC2 1192 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 SLC35F6Q8N357 371 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 CHP1Q99653 195 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 ANKRD2Q9GZV1 360 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 MAD2L2Q9UI95 211 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 ZPR1O75312 459 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 CALML3P27482 149 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 LONP1P36776 959 aaKnown RBP17.05■□□□□ 0.32
CSDC2-201ENST00000306149 JAKMIP3Q5VZ66 844 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 DTHD1Q6ZMT9 781 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 IRF2BP1Q8IU81 584 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 DISC1Q9NRI5 854 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 PCDHA6Q9UN73 950 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 PCDHA8Q9Y5H6 950 aa17.05■□□□□ 0.32
CSDC2-201ENST00000306149 LRRC10BA6NIK2 292 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 TSPY3P0CV98 308 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 TSPY8P0CW00 308 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 TM4SF1P30408 202 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 TXLNAP40222 546 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 MAPKAPK5Q8IW41 473 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 LRRC15Q8TF66 581 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 NARFQ9UHQ1 456 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 LDHBP07195 334 aaKnown RBP17.04■□□□□ 0.32
CSDC2-201ENST00000306149 NFIXQ14938 502 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 ARL6IP4Q66PJ3 421 aaKnown RBP17.04■□□□□ 0.32
CSDC2-201ENST00000306149 TPTE2Q6XPS3 522 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
CSDC2-201ENST00000306149 TFR2Q9UP52 801 aa17.04■□□□□ 0.32
CSDC2-201ENST00000306149 ITIH6Q6UXX5 1313 aa17.03■□□□□ 0.32
CSDC2-201ENST00000306149 FECHP22830 423 aa17.03■□□□□ 0.32
CSDC2-201ENST00000306149 CHMP4BP1P59074 171 aa17.03■□□□□ 0.32
CSDC2-201ENST00000306149 DGKHQ86XP1 1220 aa17.03■□□□□ 0.32
CSDC2-201ENST00000306149 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
CSDC2-201ENST00000306149 ARFGAP3Q9NP61 516 aa17.03■□□□□ 0.32
CSDC2-201ENST00000306149 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.03■□□□□ 0.32
CSDC2-201ENST00000306149 TRIM10Q9UDY6 481 aa17.03■□□□□ 0.32
CSDC2-201ENST00000306149 PARP1P09874 1014 aaKnown RBP17.03■□□□□ 0.32
CSDC2-201ENST00000306149 UBA7P41226 1012 aa17.03■□□□□ 0.32
CSDC2-201ENST00000306149 CCDC51Q96ER9 411 aa17.03■□□□□ 0.32
CSDC2-201ENST00000306149 ZNF444Q8N0Y2 327 aaPredicted RBP17.02■□□□□ 0.32
CSDC2-201ENST00000306149 ANKRD20A12PQ8NF67 263 aa17.02■□□□□ 0.32
CSDC2-201ENST00000306149 M0R2N6 131 aa17.02■□□□□ 0.31
CSDC2-201ENST00000306149 GRM4Q14833 912 aa17.02■□□□□ 0.31
CSDC2-201ENST00000306149 SRGAP1Q7Z6B7 1085 aa17.02■□□□□ 0.31
CSDC2-201ENST00000306149 TMTC1Q8IUR5 882 aa17.02■□□□□ 0.31
CSDC2-201ENST00000306149 ADSSL1Q8N142 457 aa17.02■□□□□ 0.31
CSDC2-201ENST00000306149 TMEM47Q9BQJ4 181 aa17.02■□□□□ 0.31
CSDC2-201ENST00000306149 VAT1LQ9HCJ6 419 aa17.02■□□□□ 0.31
CSDC2-201ENST00000306149 RMND1Q9NWS8 449 aa17.02■□□□□ 0.31
CSDC2-201ENST00000306149 CALCOCO1Q9P1Z2 691 aa17.02■□□□□ 0.31
CSDC2-201ENST00000306149 CDC23Q9UJX2 597 aa17.02■□□□□ 0.31
CSDC2-201ENST00000306149 TTC26A0AVF1 554 aa17.01■□□□□ 0.31
CSDC2-201ENST00000306149 TUBB2AQ13885 445 aa17.01■□□□□ 0.31
CSDC2-201ENST00000306149 BARGINQ6ZT62 677 aa17.01■□□□□ 0.31
CSDC2-201ENST00000306149 TUBB2BQ9BVA1 445 aa17.01■□□□□ 0.31
CSDC2-201ENST00000306149 CCDC151A5D8V7 595 aa17.01■□□□□ 0.31
CSDC2-201ENST00000306149 SPAG1Q07617 926 aa17.01■□□□□ 0.31
CSDC2-201ENST00000306149 CYP26C1Q6V0L0 522 aa17.01■□□□□ 0.31
CSDC2-201ENST00000306149 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
CSDC2-201ENST00000306149 KIAA1551Q9HCM1 1747 aa17.01■□□□□ 0.31
CSDC2-201ENST00000306149 CTAGE9A4FU28 777 aa17■□□□□ 0.31
CSDC2-201ENST00000306149 STXBP3O00186 592 aa17■□□□□ 0.31
CSDC2-201ENST00000306149 RPS6KA4O75676 772 aa17■□□□□ 0.31
CSDC2-201ENST00000306149 ARHGAP25P42331 645 aa17■□□□□ 0.31
CSDC2-201ENST00000306149 BRD3Q15059 726 aa17■□□□□ 0.31
CSDC2-201ENST00000306149 SPTY2D1Q68D10 685 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms