RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MYO1CO00159 1063 aa16.27■□□□□ 0.19
SCN3B-201ENST00000299333 PRDM1O75626 825 aa16.27■□□□□ 0.19
SCN3B-201ENST00000299333 PLCG2P16885 1265 aa16.27■□□□□ 0.19
SCN3B-201ENST00000299333 TIMM10P62072 90 aa16.27■□□□□ 0.19
SCN3B-201ENST00000299333 ASPHQ12797 758 aa16.27■□□□□ 0.19
SCN3B-201ENST00000299333 ACTR5Q9H9F9 607 aaPredicted RBP16.27■□□□□ 0.19
SCN3B-201ENST00000299333 PLB1Q6P1J6 1458 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 NOS1P29475 1434 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
SCN3B-201ENST00000299333 CNGA1P29973 690 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 EIF6P56537 245 aaKnown RBP16.26■□□□□ 0.19
SCN3B-201ENST00000299333 CALCRLQ16602 461 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 YIPF3Q9GZM5 350 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 CACYBPQ9HB71 228 aaKnown RBP16.26■□□□□ 0.19
SCN3B-201ENST00000299333 EPB41L5Q9HCM4 733 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.26■□□□□ 0.19
SCN3B-201ENST00000299333 CCDC138Q96M89 665 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 DRC3Q9H069 523 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 EEF1DP29692 281 aaKnown RBP16.26■□□□□ 0.19
SCN3B-201ENST00000299333 DNM2P50570 870 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 NNTQ13423 1086 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 NLRP3Q96P20 1036 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 hCG_2014768A0A024R1R8 64 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 CASP2P42575 452 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 RSBN1LQ6PCB5 846 aaPredicted RBP16.26■□□□□ 0.19
SCN3B-201ENST00000299333 MMS22LQ6ZRQ5 1243 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 CHAMP1Q96JM3 812 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
SCN3B-201ENST00000299333 LDHBP07195 334 aaKnown RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 HNRNPCP07910 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 KRT19P08727 400 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 GRAMD4Q6IC98 578 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 PARD6BQ9BYG5 372 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 ZNF711Q9Y462 761 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 ADGRL1O94910 1474 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 PASKQ96RG2 1323 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 PPP1R12AO14974 1030 aaPredicted RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 MAN1A2O60476 641 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 GNA14O95837 355 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 EEF1B2P24534 225 aaKnown RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 POLR2FP61218 127 aaKnown RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 CTDSPL2Q05D32 466 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 DCLK2Q8N568 766 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 TEKT1Q969V4 418 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 USP28Q96RU2 1077 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 B4DLN1 442 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 HMGB2P26583 209 aaKnown RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 RNASELQ05823 741 aaKnown RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 C2orf54Q08AI8 447 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 CENPKQ9BS16 269 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 VPS54Q9P1Q0 977 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 UGGT2Q9NYU1 1516 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 POLR3AO14802 1390 aaPredicted RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 HEXIM1O94992 359 aaKnown RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 XRCC5P13010 732 aaKnown RBP16.25■□□□□ 0.19
SCN3B-201ENST00000299333 GYS2P54840 703 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 RASSF7Q02833 373 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 KRT80Q6KB66 452 aa16.25■□□□□ 0.19
SCN3B-201ENST00000299333 MAGEA9P43362 315 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 KIF22Q14807 665 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 TNNI3KQ59H18 835 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 OGFOD1Q8N543 542 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 TXLNGQ9NUQ3 528 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 EPS15L1Q9UBC2 864 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 FPGT-TNNI3KV9GXZ4 949 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 ACEP12821 1306 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 GPAA1O43292 621 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 SERPINI2O75830 405 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 ADAMTS2O95450 1211 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 CASP14P31944 242 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 TBC1D1Q86TI0 1168 aaPredicted RBP16.24■□□□□ 0.19
SCN3B-201ENST00000299333 ATP8A1Q9Y2Q0 1164 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 IRS4O14654 1257 aaPredicted RBP16.24■□□□□ 0.19
SCN3B-201ENST00000299333 GPC4O75487 556 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 KRT10P13645 584 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 KRT81Q14533 505 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 KRT25Q7Z3Z0 450 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 NSMCE1Q8WV22 266 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 SETDB2Q96T68 719 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 DBNDD2Q9BQY9 259 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 SLC4A7Q9Y6M7 1214 aa16.24■□□□□ 0.19
SCN3B-201ENST00000299333 ESYT2A0FGR8 921 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 PTPN21Q16825 1174 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 TCP11X2Q5H9J9 407 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 NBPF10Q6P3W6 841 aaKnown RBP16.23■□□□□ 0.19
SCN3B-201ENST00000299333 YWHAGP61981 247 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCN3B-201ENST00000299333 KAZNQ674X7 775 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 ST13P4Q8IZP2 240 aaPredicted RBP16.23■□□□□ 0.19
SCN3B-201ENST00000299333 HDAC11Q96DB2 347 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 NDUFB9Q9Y6M9 179 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 ADCY7P51828 1080 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 TERF2Q15554 542 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 PAIP2BQ9ULR5 123 aaKnown RBP16.23■□□□□ 0.19
SCN3B-201ENST00000299333 ZNF148Q9UQR1 794 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 MAD1L1Q9Y6D9 718 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 GNGT2O14610 69 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms