RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZAP70P43403 619 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 CREB3L3Q68CJ9 461 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 HHIPL2Q6UWX4 724 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 BICDL2A1A5D9 508 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 YDJCA8MPS7 323 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 SLC9C2Q5TAH2 1124 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 AFAP1L1Q8TED9 768 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 PPP2R3BQ9Y5P8 575 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 ZNF609O15014 1411 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 AKR1B15C9JRZ8 316 aaPredicted RBP13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 ERMNQ8TAM6 284 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 MMRN2Q9H8L6 949 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 SAMD15Q9P1V8 674 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 KIF13BQ9NQT8 1826 aa13.26□□□□□ -0.29
SYNGAP1-201ENST00000293748 MAGEB6P1A0A0J9YX57 407 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 PTPDC1A2A3K4 754 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 MAGEB6Q8N7X4 407 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 DHX58Q96C10 678 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 SMC6Q96SB8 1091 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 CEP83Q9Y592 693 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 ANKRD31Q8N7Z5 1873 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 ATP2A1O14983 1001 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 NMIQ13287 307 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 ANGEL2Q5VTE6 544 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 DHX32Q7L7V1 743 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 IMPACTQ9P2X3 320 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 CLRN2A0PK11 232 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 ASIC1P78348 528 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 DNAJC21Q5F1R6 531 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 SYCP3Q8IZU3 236 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 FERMT1Q9BQL6 677 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 PICALMQ13492 652 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 CAPZA3Q96KX2 299 aa13.25□□□□□ -0.29
SYNGAP1-201ENST00000293748 LAMB2P55268 1798 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 IREB2P48200 963 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 ZBTB16Q05516 673 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 GRM1Q13255 1194 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 SREK1Q8WXA9 508 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 MTRF1LQ9UGC7 380 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 ELP1O95163 1332 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 BTDP43251 543 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 ZNF75DP51815 510 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 USP37Q86T82 979 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 SCLT1Q96NL6 688 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 TSGA10Q9BZW7 698 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 STIM2Q9P246 746 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 CSADQ9Y600 493 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 AOX1Q06278 1338 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 SALL1Q9NSC2 1324 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 TCP10L2B9ZVM9 353 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 CALML3P27482 149 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 LACTBP83111 547 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 UBXN1Q04323 297 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 TRIM14Q14142 442 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 CLSTN2Q9H4D0 955 aa13.24□□□□□ -0.29
SYNGAP1-201ENST00000293748 NDUFAB1O14561 156 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 ECE1P42892 770 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 MXRA7P84157 204 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 CCDC174Q6PII3 467 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 SELENOSQ9BQE4 189 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 MYH3P11055 1940 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 COL11A2P13942 1736 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 GNAT2P19087 354 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 CHMP4BP1P59074 171 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 CCDC122Q5T0U0 273 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 MAP1SQ66K74 1059 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 IQUBQ8NA54 791 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 TSNARE1Q96NA8 513 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 NAPGQ99747 312 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 MRIQ9BWK5 157 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 FERP16591 822 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 SETDB1Q15047 1291 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 DAAM2Q86T65 1068 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 NEK11Q8NG66 645 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 ZNF500O60304 480 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 INPP5BP32019 993 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 PAIP2Q9BPZ3 127 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-201ENST00000293748 ELF2Q15723 593 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 IFT81Q8WYA0 676 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 KRT13P13646 458 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 PPP1R2P41236 205 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 ZNF280AP59817 542 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 SIRT2Q8IXJ6 389 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 PPFIBP2Q8ND30 876 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 IFT74Q96LB3 600 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 HAUS7Q99871 368 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 MXD3Q9BW11 206 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 CARD6Q9BX69 1037 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 MKRN1Q9UHC7 482 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 CELF2O95319 508 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 CALM1P0DP23 149 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 CALM2P0DP24 149 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 CALM3P0DP25 149 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 MCAMP43121 646 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 STX17P56962 302 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 IFIT1BQ5T764 474 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms