RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 FSD1Q9BTV5 496 aa18.2■□□□□ 0.5
SOD1-201ENST00000270142 ZNF287Q9HBT7 754 aa18.2■□□□□ 0.5
SOD1-201ENST00000270142 PRDM5Q9NQX1 630 aaPredicted RBP18.2■□□□□ 0.5
SOD1-201ENST00000270142 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
SOD1-201ENST00000270142 ATP2A1O14983 1001 aa18.19■□□□□ 0.5
SOD1-201ENST00000270142 PGK1P00558 417 aa18.19■□□□□ 0.5
SOD1-201ENST00000270142 AKR1A1P14550 325 aa18.19■□□□□ 0.5
SOD1-201ENST00000270142 ZMYM1Q5SVZ6 1142 aa18.19■□□□□ 0.5
SOD1-201ENST00000270142 CPXCR1Q8N123 301 aa18.19■□□□□ 0.5
SOD1-201ENST00000270142 RAVER2Q9HCJ3 691 aaKnown RBP18.19■□□□□ 0.5
SOD1-201ENST00000270142 PDLIM7Q9NR12 457 aa18.19■□□□□ 0.5
SOD1-201ENST00000270142 MTMR10Q9NXD2 777 aa18.19■□□□□ 0.5
SOD1-201ENST00000270142 PLXNA1Q9UIW2 1896 aa18.19■□□□□ 0.5
SOD1-201ENST00000270142 PHF24Q9UPV7 400 aa18.19■□□□□ 0.5
SOD1-201ENST00000270142 DNAJC25-GNG10A0A024R161 153 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 ZBED4O75132 1171 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 TTLL1O95922 423 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 TSPY3P0CV98 308 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 TSPY8P0CW00 308 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 SLC4A3P48751 1232 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 PPARAQ07869 468 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 C1orf53Q5VUE5 145 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 SH3RF1Q7Z6J0 888 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 RNF180Q86T96 592 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 SLC17A8Q8NDX2 589 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 GMCL1P1Q8NEA9 526 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 NEDD1Q8NHV4 660 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 NACAP1Q9BZK3 213 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 NAPBQ9H115 298 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 SLC38A10Q9HBR0 1119 aa18.18■□□□□ 0.5
SOD1-201ENST00000270142 MYH4Q9Y623 1939 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 SNAI1O95863 264 aaPredicted RBP18.17■□□□□ 0.5
SOD1-201ENST00000270142 MX1P20591 662 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 PDE4BQ07343 736 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 SLFN13Q68D06 897 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 MSL3Q8N5Y2 521 aaKnown RBP18.17■□□□□ 0.5
SOD1-201ENST00000270142 BADQ92934 168 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 DDX11Q96FC9 970 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 FEM1BQ9UK73 627 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 SYNPO2Q9UMS6 1093 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 CNPY2Q9Y2B0 182 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 CTDP1Q9Y5B0 961 aaPredicted RBP18.17■□□□□ 0.5
SOD1-201ENST00000270142 SYNGAP1Q96PV0 1343 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 SALL3Q9BXA9 1300 aa18.17■□□□□ 0.5
SOD1-201ENST00000270142 TRIM43BA6NCK2 446 aa18.16■□□□□ 0.5
SOD1-201ENST00000270142 FOXP2O15409 715 aa18.16■□□□□ 0.5
SOD1-201ENST00000270142 ADAMTS4O75173 837 aa18.16■□□□□ 0.5
SOD1-201ENST00000270142 RRP1P56182 461 aaKnown RBP18.16■□□□□ 0.5
SOD1-201ENST00000270142 TFAP4Q01664 338 aa18.16■□□□□ 0.5
SOD1-201ENST00000270142 MAMDC4Q6UXC1 1216 aa18.16■□□□□ 0.5
SOD1-201ENST00000270142 CCDC129Q6ZRS4 1044 aa18.16■□□□□ 0.5
SOD1-201ENST00000270142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.16■□□□□ 0.5
SOD1-201ENST00000270142 TRIM43Q96BQ3 446 aaPredicted RBP18.16■□□□□ 0.5
SOD1-201ENST00000270142 ZHX1Q9UKY1 873 aaPredicted RBP18.16■□□□□ 0.5
SOD1-201ENST00000270142 STXBP5LQ9Y2K9 1186 aa18.16■□□□□ 0.5
SOD1-201ENST00000270142 SMCHD1A6NHR9 2005 aa18.16■□□□□ 0.5
SOD1-201ENST00000270142 A0A1W2PQ45 241 aaPredicted RBP18.15■□□□□ 0.5
SOD1-201ENST00000270142 A0A1W2PQY0 241 aa18.15■□□□□ 0.5
SOD1-201ENST00000270142 SLC3A2P08195 630 aaKnown RBP18.15■□□□□ 0.5
SOD1-201ENST00000270142 BMP3P12645 472 aa18.15■□□□□ 0.5
SOD1-201ENST00000270142 TLE2Q04725 743 aa18.15■□□□□ 0.5
SOD1-201ENST00000270142 C9orf50Q5SZB4 431 aa18.15■□□□□ 0.5
SOD1-201ENST00000270142 FGD4Q96M96 766 aa18.15■□□□□ 0.5
SOD1-201ENST00000270142 SYNRGQ9UMZ2 1314 aa18.15■□□□□ 0.5
SOD1-201ENST00000270142 POTEB2H3BUK9 544 aa18.14■□□□□ 0.49
SOD1-201ENST00000270142 ITGB8P26012 769 aa18.14■□□□□ 0.49
SOD1-201ENST00000270142 OAZ1P54368 228 aa18.14■□□□□ 0.49
SOD1-201ENST00000270142 SHHQ15465 462 aa18.14■□□□□ 0.49
SOD1-201ENST00000270142 ZNF467Q7Z7K2 595 aaPredicted RBP18.14■□□□□ 0.49
SOD1-201ENST00000270142 ANKRD35Q8N283 1001 aa18.14■□□□□ 0.49
SOD1-201ENST00000270142 CHST13Q8NET6 341 aa18.14■□□□□ 0.49
SOD1-201ENST00000270142 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.14■□□□□ 0.49
SOD1-201ENST00000270142 FAM184BQ9ULE4 1060 aa18.14■□□□□ 0.49
SOD1-201ENST00000270142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.14■□□□□ 0.49
SOD1-201ENST00000270142 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
SOD1-201ENST00000270142 CLTBP09497 229 aa18.13■□□□□ 0.49
SOD1-201ENST00000270142 CTDSPL2Q05D32 466 aa18.13■□□□□ 0.49
SOD1-201ENST00000270142 KLHDC9Q8NEP7 349 aa18.13■□□□□ 0.49
SOD1-201ENST00000270142 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
SOD1-201ENST00000270142 INCENPQ9NQS7 918 aa18.13■□□□□ 0.49
SOD1-201ENST00000270142 FBXO40Q9UH90 709 aa18.13■□□□□ 0.49
SOD1-201ENST00000270142 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
SOD1-201ENST00000270142 MYADML2A6NDP7 307 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 ADCY6O43306 1168 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 PQBP1O60828 265 aaKnown RBP18.12■□□□□ 0.49
SOD1-201ENST00000270142 STAT2P52630 851 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 ACVR2BQ13705 512 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 ANKRD45Q5TZF3 282 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 VPS53Q5VIR6 699 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 FAM109BQ6ICB4 259 aaPredicted RBP18.12■□□□□ 0.49
SOD1-201ENST00000270142 GMCL1Q96IK5 515 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 GUCD1Q96NT3 240 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 CRBNQ96SW2 442 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 TSEN34Q9BSV6 310 aaKnown RBP18.12■□□□□ 0.49
SOD1-201ENST00000270142 HOMER2Q9NSB8 354 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 TACC3Q9Y6A5 838 aa18.12■□□□□ 0.49
SOD1-201ENST00000270142 TSPY2A6NKD2 308 aa18.11■□□□□ 0.49
SOD1-201ENST00000270142 NMT2O60551 498 aa18.11■□□□□ 0.49
SOD1-201ENST00000270142 FDX1P10109 184 aa18.11■□□□□ 0.49
SOD1-201ENST00000270142 MCCP23508 829 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms