RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 FIBCD1Q8N539 461 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 THAP3Q8WTV1 239 aaPredicted RBP6.7□□□□□ -1.34
CCDC54-201ENST00000261058 BRF1Q92994 677 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 HSPA12BQ96MM6 686 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 SPATA9Q9BWV2 254 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 TRIT1Q9H3H1 467 aaKnown RBP6.7□□□□□ -1.34
CCDC54-201ENST00000261058 ARHGEF4Q9NR80 690 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 GPATCH2Q9NW75 528 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 PRNPP04156 253 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 INTS5Q6P9B9 1019 aaKnown RBP6.69□□□□□ -1.34
CCDC54-201ENST00000261058 ADAT2Q7Z6V5 191 aaKnown RBP6.69□□□□□ -1.34
CCDC54-201ENST00000261058 WFDC3Q8IUB2 231 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 ASCC2Q9H1I8 757 aaPredicted RBP6.69□□□□□ -1.34
CCDC54-201ENST00000261058 KANSL2Q9H9L4 492 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 PFDN2Q9UHV9 154 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 MINPP1Q9UNW1 487 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 TMA7Q9Y2S6 64 aaKnown RBP6.69□□□□□ -1.34
CCDC54-201ENST00000261058 MRPL42Q9Y6G3 142 aaKnown RBP6.69□□□□□ -1.34
CCDC54-201ENST00000261058 KDM2BQ8NHM5 1336 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 AGRPO00253 132 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 ENPP3O14638 875 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 GSNP06396 782 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 PRKCQQ04759 706 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 NOL9Q5SY16 702 aaKnown RBP6.68□□□□□ -1.34
CCDC54-201ENST00000261058 CDKAL1Q5VV42 579 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 POMZP3Q6PJE2 187 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 ARHGAP27Q6ZUM4 889 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 TMPRSS7Q7RTY8 843 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 CRACR2BQ8N4Y2 399 aaPredicted RBP6.68□□□□□ -1.34
CCDC54-201ENST00000261058 ZBTB38Q8NAP3 1195 aaPredicted RBP6.68□□□□□ -1.34
CCDC54-201ENST00000261058 LRRN4CLQ8ND94 238 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 ADCY4Q8NFM4 1077 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 SH3TC2Q8TF17 1288 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 MISP3Q96FF7 219 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 TCTN2Q96GX1 697 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 NOL6Q9H6R4 1146 aaKnown RBP6.68□□□□□ -1.34
CCDC54-201ENST00000261058 TMEM260Q9NX78 707 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 VAV3Q9UKW4 847 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 AKT3Q9Y243 479 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 ZNF281Q9Y2X9 895 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 WASH4PA8MWX3 477 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 KIAA1324LA8MWY0 1029 aaPredicted RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 H0Y8X5 98 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 H3BS24 57 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 TBX1O43435 398 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 BMP8BP34820 402 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 CD97P48960 835 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 PPP2R2AP63151 447 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SQSTM1Q13501 440 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 ZC3H12BQ5HYM0 836 aaKnown RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 LINC00116Q8NCU8 138 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 HRASLS5Q96KN8 279 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 LGR4Q9BXB1 951 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SUGT1Q9Y2Z0 365 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SF3B6Q9Y3B4 125 aaKnown RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SHROOM4Q9ULL8 1493 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SMARCA5O60264 1052 aaPredicted RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 COBLO75128 1261 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 MED26O95402 600 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 ESR1P03372 595 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 FAM153BP0C7A2 387 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 FGFR1P11362 822 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SPINK2P20155 84 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 TPP2P29144 1249 aaPredicted RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 GRIK1P39086 918 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 CYP4F3Q08477 520 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 DTX1Q86Y01 620 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 USHBP1Q8N6Y0 703 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 ASB11Q8WXH4 323 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 UBE2FQ969M7 185 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 BSDC1Q9NW68 430 aaPredicted RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 NOP56O00567 594 aaKnown RBP6.66□□□□□ -1.34
CCDC54-201ENST00000261058 ZNF205O95201 554 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 SCG5P05408 212 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 HSP90AA2PQ14568 343 aaPredicted RBP6.66□□□□□ -1.34
CCDC54-201ENST00000261058 CLEC16AQ2KHT3 1053 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 GTF2IRD2BQ6EKJ0 949 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 SDE2Q6IQ49 451 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 CRTC3Q6UUV7 619 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 NFXL1Q6ZNB6 911 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 GTF2IRD2Q86UP8 949 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 BCL7CQ8WUZ0 217 aaPredicted RBP6.66□□□□□ -1.34
CCDC54-201ENST00000261058 MCMBPQ9BTE3 642 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 AARSD1Q9BTE6 412 aaKnown RBP6.66□□□□□ -1.34
CCDC54-201ENST00000261058 DSCC1Q9BVC3 393 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 NKX2-4Q9H2Z4 354 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 ATP13A1Q9HD20 1204 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 ZSWIM5Q9P217 1185 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 PTCH2Q9Y6C5 1203 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 VAV1P15498 845 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 GRIA2P42262 883 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 PPP2R5DQ14738 602 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 TMEM67Q5HYA8 995 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 FOXB2Q5VYV0 432 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 STK11IPQ8N1F8 1099 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 ZSWIM2Q8NEG5 633 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 KISS1RQ969F8 398 aaPredicted RBP6.65□□□□□ -1.35
CCDC54-201ENST00000261058 C1orf159Q96HA4 380 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 SLC12A9Q9BXP2 914 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 CYP26B1Q9NR63 512 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms