RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 NEDD4P46934 1319 aa17.74■□□□□ 0.43
SLC6A8-201ENST00000253122 E7EVH7 732 aa17.74■□□□□ 0.43
SLC6A8-201ENST00000253122 RABL6Q3YEC7 729 aaPredicted RBP17.74■□□□□ 0.43
SLC6A8-201ENST00000253122 FANCGO15287 622 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 MAGEA1P43355 309 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 DTHD1Q6ZMT9 781 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 FAM114A1Q8IWE2 563 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 RFX7Q2KHR2 1363 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 TTC26A0AVF1 554 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 ADD2P35612 726 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 TRIM49BA6NDI0 452 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 H7C1W4 665 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 STARD3NLO95772 234 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 GUCY2CP25092 1073 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 TBX2Q13207 712 aaPredicted RBP17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 TMEM139Q8IV31 216 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 MSANTD4Q8NCY6 345 aa17.73■□□□□ 0.43
SLC6A8-201ENST00000253122 COL18A1P39060 1754 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 PALLDQ8WX93 1383 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 GBP2P32456 591 aaPredicted RBP17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 GOPCQ9HD26 462 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 TSPY2A6NKD2 308 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 IRS4O14654 1257 aaPredicted RBP17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 BUB1O43683 1085 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 ABL1P00519 1130 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 RPN1P04843 607 aaKnown RBP17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 MCAMP43121 646 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 FOXO4P98177 505 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 PPARAQ07869 468 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 PDE4DQ08499 809 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 IFT88Q13099 833 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 NCAPGQ9BPX3 1015 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 HSD3B7Q9H2F3 369 aa17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 PIH1D3Q9NQM4 214 aaKnown RBP17.72■□□□□ 0.43
SLC6A8-201ENST00000253122 KLHL7Q8IXQ5 586 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 CRACR2BQ8N4Y2 399 aaPredicted RBP17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 CACNA1FO60840 1977 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 CUL4BQ13620 913 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 PTPROQ16827 1216 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 TCP11X2Q5H9J9 407 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 SDR42E1Q8WUS8 393 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 NGLY1Q96IV0 654 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 CDCA7Q9BWT1 371 aaPredicted RBP17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 LY9Q9HBG7 655 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 GOLGA8KD6RF30 607 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 H7C1D1 291 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 CLSTN1O94985 981 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 ATP2B2Q01814 1243 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 CCDC43Q96MW1 224 aaKnown RBP17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 MAP3K14Q99558 947 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 LRWD1Q9UFC0 647 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 HPCAL4Q9UM19 191 aa17.71■□□□□ 0.43
SLC6A8-201ENST00000253122 CD44P16070 742 aaKnown RBP17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 ZNF18P17022 549 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 IGHMBP2P38935 993 aaKnown RBP17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 ERVK-24P63145 666 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 DDB1Q16531 1140 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 CCDC40Q4G0X9 1142 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 CPLX4Q7Z7G2 160 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 ROBO1Q9Y6N7 1651 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 SNAP23O00161 211 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 AMOTL1Q8IY63 956 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 VAT1LQ9HCJ6 419 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 FAM184BQ9ULE4 1060 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 TNKSO95271 1327 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 NHSL1Q5SYE7 1610 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 GTPBP6O43824 516 aaPredicted RBP17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 KRT18P05783 430 aaKnown RBP17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 ARHGAP25P42331 645 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 IRAK1P51617 712 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 IFT20Q8IY31 132 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 SYNE4Q8N205 404 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 PLCD4Q9BRC7 762 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 TSGA10Q9BZW7 698 aa17.7■□□□□ 0.42
SLC6A8-201ENST00000253122 DNM2P50570 870 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 RRAGAQ7L523 313 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 TRIM58Q8NG06 486 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 RAB21Q9UL25 225 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 HEG1Q9ULI3 1381 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 EZRP15311 586 aaKnown RBP17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 GUCY2DQ02846 1103 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 PRPF4BQ13523 1007 aaKnown RBP17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 CEP85LQ5SZL2 805 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 CABS1Q96KC9 395 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 TUBGCP2Q9BSJ2 902 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 SOGA3Q5TF21 947 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 HEATR3Q7Z4Q2 680 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 SH2D3CQ8N5H7 860 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 BANK1Q8NDB2 785 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 SMCR8Q8TEV9 937 aaPredicted RBP17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 EHD4Q9H223 541 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 GREM2Q9H772 168 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 NLRC4Q9NPP4 1024 aa17.69■□□□□ 0.42
SLC6A8-201ENST00000253122 MOCS3O95396 460 aa17.68■□□□□ 0.42
SLC6A8-201ENST00000253122 CCDC172P0C7W6 258 aa17.68■□□□□ 0.42
SLC6A8-201ENST00000253122 NNTQ13423 1086 aa17.68■□□□□ 0.42
SLC6A8-201ENST00000253122 SPATA5Q8NB90 893 aa17.68■□□□□ 0.42
SLC6A8-201ENST00000253122 NHEJ1Q9H9Q4 299 aaPredicted RBP17.68■□□□□ 0.42
SLC6A8-201ENST00000253122 SMIM23A6NLE4 172 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms