RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PDP2Q9P2J9 529 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 KCNA3P22001 575 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 PCYT1AP49585 367 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 DNAJC9Q8WXX5 260 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 GORASP1Q9BQQ3 440 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 PNMA6EA0A0J9YXQ4 647 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 SEC24CP53992 1094 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 RBM43Q6ZSC3 357 aaKnown RBP14.15□□□□□ -0.14
VAMP4-201ENST00000236192 LONP2Q86WA8 852 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 PPP1R14CQ8TAE6 165 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 CUL7Q14999 1698 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 KRIT1O00522 736 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 PPP6R2O75170 966 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 ATP4AP20648 1035 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 DNM2P50570 870 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 RCN2Q14257 317 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 FUKQ8N0W3 1084 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 FMR1NBQ8N0W7 255 aaPredicted RBP14.15□□□□□ -0.14
VAMP4-201ENST00000236192 IRX2Q9BZI1 471 aaPredicted RBP14.15□□□□□ -0.14
VAMP4-201ENST00000236192 KDM4CQ9H3R0 1056 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 INTUQ9ULD6 942 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 SCINQ9Y6U3 715 aa14.15□□□□□ -0.14
VAMP4-201ENST00000236192 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
VAMP4-201ENST00000236192 FAM200BP0CF97 657 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 CUL4BQ13620 913 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 ZNF827Q17R98 1081 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 NAF1Q96HR8 494 aaKnown RBP14.14□□□□□ -0.15
VAMP4-201ENST00000236192 MRPL44Q9H9J2 332 aaKnown RBP14.14□□□□□ -0.15
VAMP4-201ENST00000236192 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 CC2D2AQ9P2K1 1620 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 SERPINB4P48594 390 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 KRT24Q2M2I5 525 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 MAP3K21Q5TCX8 1036 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 OLFML2BQ68BL8 750 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 PDCD7Q8N8D1 485 aaKnown RBP14.14□□□□□ -0.15
VAMP4-201ENST00000236192 EMILIN1Q9Y6C2 1016 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 LIN7AO14910 233 aaPredicted RBP14.14□□□□□ -0.15
VAMP4-201ENST00000236192 CYLC2Q14093 348 aaPredicted RBP14.14□□□□□ -0.15
VAMP4-201ENST00000236192 SYCE1Q8N0S2 351 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 ZNF274Q96GC6 653 aaPredicted RBP14.14□□□□□ -0.15
VAMP4-201ENST00000236192 KCNK3O14649 394 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 GHRP10912 638 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 VWA3BQ502W6 1294 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 ANKRD20A8PQ5CZ79 823 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 C2CD5Q86YS7 1000 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 MAGEC3Q8TD91 643 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 EZH1Q92800 747 aaPredicted RBP14.14□□□□□ -0.15
VAMP4-201ENST00000236192 CALML4Q96GE6 196 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 TAF1DQ9H5J8 278 aaPredicted RBP14.14□□□□□ -0.15
VAMP4-201ENST00000236192 SYNCQ9H7C4 482 aa14.14□□□□□ -0.15
VAMP4-201ENST00000236192 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 MAGOHP61326 146 aaKnown RBP14.13□□□□□ -0.15
VAMP4-201ENST00000236192 SLC39A14Q15043 492 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 UNC5CLQ8IV45 518 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 CSGALNACT2Q8N6G5 542 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 MAGOHBQ96A72 148 aaKnown RBP14.13□□□□□ -0.15
VAMP4-201ENST00000236192 MMS19Q96T76 1030 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 SAMSN1Q9NSI8 373 aaKnown RBP14.13□□□□□ -0.15
VAMP4-201ENST00000236192 UTP6Q9NYH9 597 aaKnown RBP14.13□□□□□ -0.15
VAMP4-201ENST00000236192 A0A087WZG4 1122 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 CWF19L1Q69YN2 538 aaKnown RBP14.13□□□□□ -0.15
VAMP4-201ENST00000236192 ARHGAP5Q13017 1502 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 IL9RQ01113 521 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 SCYL3Q8IZE3 742 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 NOA1Q8NC60 698 aaKnown RBP14.13□□□□□ -0.15
VAMP4-201ENST00000236192 MAN1B1Q9UKM7 699 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 GSTA1P08263 222 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 DHX9Q08211 1270 aaKnown RBP14.13□□□□□ -0.15
VAMP4-201ENST00000236192 TRIM65Q6PJ69 517 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 LRIG3Q6UXM1 1119 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 LRRC27Q9C0I9 530 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 CARD9Q9H257 536 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 DPH5Q9H2P9 285 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 MMADHCQ9H3L0 296 aaPredicted RBP14.13□□□□□ -0.15
VAMP4-201ENST00000236192 DDX20Q9UHI6 824 aaKnown RBP14.13□□□□□ -0.15
VAMP4-201ENST00000236192 A2MP01023 1474 aa14.13□□□□□ -0.15
VAMP4-201ENST00000236192 BUB1O43683 1085 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 TMED10P49755 219 aaKnown RBP14.12□□□□□ -0.15
VAMP4-201ENST00000236192 HELLSQ9NRZ9 838 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 ARHGAP10A1A4S6 786 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 SEL1L2Q5TEA6 688 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 RASGRP2Q7LDG7 609 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.12□□□□□ -0.15
VAMP4-201ENST00000236192 ETNK1Q9HBU6 452 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 PTCH1Q13635 1447 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 MAPK13O15264 365 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 MAP4K1Q92918 833 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 STRN4Q9NRL3 753 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 HDAC6Q9UBN7 1215 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 BZW1Q7L1Q6 419 aaKnown RBP14.12□□□□□ -0.15
VAMP4-201ENST00000236192 CCDC68Q9H2F9 335 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 CCDC87Q9NVE4 849 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 CEP126Q9P2H0 1117 aa14.12□□□□□ -0.15
VAMP4-201ENST00000236192 H7C1D1 291 aa14.11□□□□□ -0.15
VAMP4-201ENST00000236192 NVLO15381 856 aaKnown RBP14.11□□□□□ -0.15
VAMP4-201ENST00000236192 GJA8P48165 433 aa14.11□□□□□ -0.15
VAMP4-201ENST00000236192 C6orf118Q5T5N4 469 aa14.11□□□□□ -0.15
VAMP4-201ENST00000236192 TRPM8Q7Z2W7 1104 aa14.11□□□□□ -0.15
VAMP4-201ENST00000236192 ABHD10Q9NUJ1 306 aa14.11□□□□□ -0.15
VAMP4-201ENST00000236192 CHMP2BQ9UQN3 213 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms