RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 PRKG1Q13976 671 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 ZNF365Q70YC5 407 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 IPO4Q8TEX9 1081 aaKnown RBP12.76□□□□□ -0.37
NOD1-201ENST00000222823 KIFC2Q96AC6 838 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 MAK16Q9BXY0 300 aaKnown RBP12.76□□□□□ -0.37
NOD1-201ENST00000222823 NUCKS1Q9H1E3 243 aaKnown RBP12.76□□□□□ -0.37
NOD1-201ENST00000222823 WDR17Q8IZU2 1322 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 PPM1FP49593 454 aaPredicted RBP12.76□□□□□ -0.37
NOD1-201ENST00000222823 RBM6P78332 1123 aaKnown RBP12.76□□□□□ -0.37
NOD1-201ENST00000222823 KRBA2Q6ZNG9 492 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 NEK8Q86SG6 692 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 GPR161Q8N6U8 529 aaKnown RBP12.76□□□□□ -0.37
NOD1-201ENST00000222823 MRFAP1L1Q96HT8 127 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 ZNF804BA4D1E1 1349 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 CA8P35219 290 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 TECP42680 631 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 LIN9Q5TKA1 542 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 UBL4BQ8N7F7 174 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 TRIML1Q8N9V2 468 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 CLIC6Q96NY7 704 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 FAM169AQ9Y6X4 670 aa12.76□□□□□ -0.37
NOD1-201ENST00000222823 BCRP11274 1271 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 BRDTQ58F21 947 aaPredicted RBP12.75□□□□□ -0.37
NOD1-201ENST00000222823 SFMBT2Q5VUG0 894 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 C2CD5Q86YS7 1000 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 CCDC51Q96ER9 411 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 CEP63Q96MT8 703 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 OR52Z1P0C646 297 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 SLC8A3P57103 927 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 PTGDRQ13258 359 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 RDH13Q8NBN7 331 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 KIAA1524Q8TCG1 905 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 IFIH1Q9BYX4 1025 aaKnown RBP12.75□□□□□ -0.37
NOD1-201ENST00000222823 AZI2Q9H6S1 392 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 RTEL1Q9NZ71 1219 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 AGTPBP1Q9UPW5 1226 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 MED23Q9ULK4 1368 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 BTDP43251 543 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 SCNN1DP51172 638 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 NDUFA8P51970 172 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 MYOCDQ8IZQ8 938 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 LRRC47Q8N1G4 583 aaKnown RBP12.75□□□□□ -0.37
NOD1-201ENST00000222823 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.75□□□□□ -0.37
NOD1-201ENST00000222823 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.37
NOD1-201ENST00000222823 SMC6Q96SB8 1091 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 TRIM31Q9BZY9 425 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 FANCLQ9NW38 375 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 SERPINA10Q9UK55 444 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 UTYO14607 1347 aa12.75□□□□□ -0.37
NOD1-201ENST00000222823 GALNT17Q6IS24 598 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 TYW1BQ6NUM6 668 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 NLRX1Q86UT6 975 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 IFT20Q8IY31 132 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 PCDHA5Q9Y5H7 936 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 KDM3AQ9Y4C1 1321 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 DDAH1O94760 285 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 RPS6KA1Q15418 735 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 PPM1EQ8WY54 764 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 IQCDQ96DY2 449 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 ZNF408Q9H9D4 720 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 NKIRAS1Q9NYS0 192 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 SAMD15Q9P1V8 674 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 CARMIL3Q8ND23 1372 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 HPDP32754 393 aaPredicted RBP12.74□□□□□ -0.37
NOD1-201ENST00000222823 DNM2P50570 870 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 LRMPQ12912 555 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 DOK7Q18PE1 504 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 MICALL1Q8N3F8 863 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 FLAD1Q8NFF5 587 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 ZMYND15Q9H091 742 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 CLIC4Q9Y696 253 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 KCNJ18B7U540 433 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 H7C1D1 291 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 CD19P15391 556 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 TNFAIP1Q13829 316 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 KCNJ12Q14500 433 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 RABL6Q3YEC7 729 aaPredicted RBP12.74□□□□□ -0.37
NOD1-201ENST00000222823 CERKLQ49MI3 558 aaPredicted RBP12.74□□□□□ -0.37
NOD1-201ENST00000222823 PRR16Q569H4 304 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 PEX26Q7Z412 305 aa12.74□□□□□ -0.37
NOD1-201ENST00000222823 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.74□□□□□ -0.37
NOD1-201ENST00000222823 UTP11Q9Y3A2 253 aaKnown RBP12.74□□□□□ -0.37
NOD1-201ENST00000222823 FRMPD2Q68DX3 1309 aaPredicted RBP12.73□□□□□ -0.37
NOD1-201ENST00000222823 XRCC5P13010 732 aaKnown RBP12.73□□□□□ -0.37
NOD1-201ENST00000222823 SLC39A14Q15043 492 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 DCUN1D2Q6PH85 259 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
NOD1-201ENST00000222823 GNA14O95837 355 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 ARHGAP44Q17R89 818 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 MSL1Q68DK7 614 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 DAAM2Q86T65 1068 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 KLHL7Q8IXQ5 586 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 IWS1Q96ST2 819 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms