RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 Trim34aQ99PP6 485 aa7.47□□□□□ -1.21
Nck1-201ENSMUST00000112874 Tdrd12Q9CWU0 1215 aa7.47□□□□□ -1.21
Nck1-201ENSMUST00000112874 Mrpl12Q9DB15 201 aaKnown RBP7.47□□□□□ -1.21
Nck1-201ENSMUST00000112874 Mlh1Q9JK91 760 aa7.47□□□□□ -1.21
Nck1-201ENSMUST00000112874 Crim1Q9JLL0 1037 aa7.47□□□□□ -1.21
Nck1-201ENSMUST00000112874 Itgb1bp2Q9R000 350 aa7.47□□□□□ -1.21
Nck1-201ENSMUST00000112874 RpgrQ9R0X5 1001 aa7.47□□□□□ -1.21
Nck1-201ENSMUST00000112874 Gm6657A0A1B0GRJ3 277 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Syndig1A2ANU3 258 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Ptrhd1D3Z4S3 140 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Clk2O35491 499 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Hdac3O88895 424 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Krt10P02535 570 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Rpl13P47963 211 aaKnown RBP7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Dpf3P58269 378 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Perm1Q149B8 807 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Rsph3aQ3UFY4 516 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Zfp560Q3URI6 754 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Scnn1aQ61180 699 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Map3k7Q62073 579 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Ppp1r13bQ62415 1087 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Olfr798Q7TRH8 311 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Sgsm2Q80U12 1005 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Tbc1d22bQ80VE5 505 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Znf598Q80YR4 908 aaKnown RBP7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Mtrf1lQ8BJU9 373 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Acbd3Q8BMP6 525 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Slc4a8Q8JZR6 1089 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 BphlQ8R164 291 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Clp1Q99LI9 425 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Nkiras2Q9CR56 191 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Lce1dQ9D731 133 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 RhouQ9EQT3 261 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Gdpd2Q9ESM6 539 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Habp4Q9JKS5 411 aaKnown RBP7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Sart3Q9JLI8 962 aaKnown RBP7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Ddx25Q9QY15 484 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Nphp1Q9QY53 687 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 IncenpQ9WU62 880 aa7.46□□□□□ -1.22
Nck1-201ENSMUST00000112874 Slc4a11A2AJN7 862 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Gbp4A4UUI3 631 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Apol7bB1AQP7 369 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Clip3B9EHT4 547 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Casq2O09161 415 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Adam19O35674 920 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 TsksO54887 585 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Rps2P25444 293 aaKnown RBP7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 PlaaP27612 794 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Hoxc11P31313 304 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Nr5a1P33242 462 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Zbtb14Q08376 449 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Krtap10-4Q08EG8 221 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Kiaa1468Q148V7 1216 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Cdca2Q14B71 982 aaKnown RBP7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Apol7eQ3UZ24 369 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Birc2Q62210 612 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Pcdhb14Q6PB90 796 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Carnmt1Q80UY1 400 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Pramel6Q810Y9 485 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 AsphQ8BSY0 741 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Rps6ka5Q8C050 863 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 SrrdQ8K2M3 249 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Hoxc12Q8K5B8 280 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Ssx2ipQ8VC66 615 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Kri1Q8VDQ9 704 aaKnown RBP7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Ttc39cQ8VE09 580 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Bicd2Q921C5 820 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Cdca5Q9CPY3 264 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Abcb6Q9DC29 842 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Tuba8Q9JJZ2 449 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Ripk3Q9QZL0 486 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Krt71Q9R0H5 524 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Snx1Q9WV80 522 aa7.45□□□□□ -1.22
Nck1-201ENSMUST00000112874 Gm382B1AXN3 1250 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Zkscan7E9PVW1 718 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Gm44503E9PYU5 387 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Plekha5E9Q6H8 1269 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Olfr67F8VPJ8 320 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Trim55G3X8Y1 545 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Dsg2O55111 1122 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Mybpc3O70468 1270 aaKnown RBP7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 NppaP05125 152 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 LdhbP16125 334 aaKnown RBP7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Aldh3a2P47740 484 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Nr2c2P49117 596 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Slc10a5Q5PT54 434 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 P4ha1Q60715 534 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 PodnQ7TQ62 611 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Gpr139Q80UC8 345 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Nim1kQ8BHI9 436 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 E330017A01RikQ8BU47 192 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Iffo1Q8BXL9 562 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Tsr2Q8C8T8 191 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 RydenQ8CAK3 290 aaKnown RBP7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Zc3h10Q8R205 435 aaKnown RBP7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Plpp7Q91WB2 271 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 LsrQ99KG5 594 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 Eif2s2Q99L45 331 aaKnown RBP7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 SncaipQ99ME3 962 aa7.44□□□□□ -1.22
Nck1-201ENSMUST00000112874 CatsperzQ9CQP8 194 aa7.44□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms