RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 EPB41L4AQ9HCS5 686 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-213ENST00000641272 MINDY4BA8MYZ0 360 aa20.03■□□□□ 0.8
PHGDH-213ENST00000641272 MSCO60682 206 aa20.03■□□□□ 0.8
PHGDH-213ENST00000641272 BMP8BP34820 402 aa20.03■□□□□ 0.8
PHGDH-213ENST00000641272 PRAMEF19Q5SWL8 479 aa20.03■□□□□ 0.8
PHGDH-213ENST00000641272 KBTBD3Q8NAB2 608 aa20.03■□□□□ 0.8
PHGDH-213ENST00000641272 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.03■□□□□ 0.8
PHGDH-213ENST00000641272 ROBO3Q96MS0 1386 aa20.03■□□□□ 0.8
PHGDH-213ENST00000641272 GSG1L2A8MUP6 293 aa20.02■□□□□ 0.8
PHGDH-213ENST00000641272 M0R2C6 588 aa20.02■□□□□ 0.8
PHGDH-213ENST00000641272 IGHA2P01877 340 aa20.02■□□□□ 0.8
PHGDH-213ENST00000641272 PGK2P07205 417 aa20.02■□□□□ 0.8
PHGDH-213ENST00000641272 OLFML2BQ68BL8 750 aa20.02■□□□□ 0.8
PHGDH-213ENST00000641272 TDHQ8IZJ6 230 aa20.02■□□□□ 0.8
PHGDH-213ENST00000641272 APPBP2Q92624 585 aa20.02■□□□□ 0.8
PHGDH-213ENST00000641272 MROH8Q9H579 483 aa20.02■□□□□ 0.8
PHGDH-213ENST00000641272 KANSL2Q9H9L4 492 aa20.02■□□□□ 0.8
PHGDH-213ENST00000641272 GOPCQ9HD26 462 aa20.02■□□□□ 0.8
PHGDH-213ENST00000641272 DNM1LO00429 736 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 GPAA1O43292 621 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 STRNO43815 780 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 PRDM1O75626 825 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 RASA1P20936 1047 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 TDO2P48775 406 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 Q7L0L9 218 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 MAML3Q96JK9 1138 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 MMP19Q99542 508 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 DCTPP1Q9H773 170 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 PPP1R9AQ9ULJ8 1098 aa20.01■□□□□ 0.79
PHGDH-213ENST00000641272 FCER1AP12319 257 aa20■□□□□ 0.79
PHGDH-213ENST00000641272 RTP1P59025 263 aa20■□□□□ 0.79
PHGDH-213ENST00000641272 FAM47AQ5JRC9 791 aa20■□□□□ 0.79
PHGDH-213ENST00000641272 OTUD7AQ8TE49 926 aaPredicted RBP20■□□□□ 0.79
PHGDH-213ENST00000641272 MKNK2Q9HBH9 465 aa20■□□□□ 0.79
PHGDH-213ENST00000641272 ATP11BQ9Y2G3 1177 aa20■□□□□ 0.79
PHGDH-213ENST00000641272 KBTBD13C9JR72 458 aa19.99■□□□□ 0.79
PHGDH-213ENST00000641272 RNF113AO15541 343 aaKnown RBP19.99■□□□□ 0.79
PHGDH-213ENST00000641272 SEPT4O43236 478 aa19.99■□□□□ 0.79
PHGDH-213ENST00000641272 SLC5A4Q9NY91 659 aa19.99■□□□□ 0.79
PHGDH-213ENST00000641272 VWA5AO00534 786 aa19.98■□□□□ 0.79
PHGDH-213ENST00000641272 SLC25A27O95847 323 aa19.98■□□□□ 0.79
PHGDH-213ENST00000641272 NDUFB10O96000 172 aa19.98■□□□□ 0.79
PHGDH-213ENST00000641272 APPP05067 770 aa19.98■□□□□ 0.79
PHGDH-213ENST00000641272 SLC4A3P48751 1232 aa19.98■□□□□ 0.79
PHGDH-213ENST00000641272 SBK1Q52WX2 424 aa19.98■□□□□ 0.79
PHGDH-213ENST00000641272 RIOX2Q8IUF8 465 aa19.98■□□□□ 0.79
PHGDH-213ENST00000641272 ABRAQ8N0Z2 381 aa19.98■□□□□ 0.79
PHGDH-213ENST00000641272 REPS2Q8NFH8 660 aa19.98■□□□□ 0.79
PHGDH-213ENST00000641272 LENG1Q96BZ8 264 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-213ENST00000641272 SEC62Q99442 399 aaKnown RBP19.98■□□□□ 0.79
PHGDH-213ENST00000641272 ZNF214Q9UL59 606 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-213ENST00000641272 KCTD2Q14681 263 aa19.97■□□□□ 0.79
PHGDH-213ENST00000641272 LRRC47Q8N1G4 583 aaKnown RBP19.97■□□□□ 0.79
PHGDH-213ENST00000641272 FERMT2Q96AC1 680 aa19.97■□□□□ 0.79
PHGDH-213ENST00000641272 SLF1Q9BQI6 1058 aa19.97■□□□□ 0.79
PHGDH-213ENST00000641272 PRDM5Q9NQX1 630 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-213ENST00000641272 PCDHB15Q9Y5E8 787 aa19.97■□□□□ 0.79
PHGDH-213ENST00000641272 SMCHD1A6NHR9 2005 aa19.97■□□□□ 0.79
PHGDH-213ENST00000641272 DNAH12Q6ZR08 3092 aa19.96■□□□□ 0.79
PHGDH-213ENST00000641272 STAT3P40763 770 aa19.96■□□□□ 0.79
PHGDH-213ENST00000641272 TRIM60Q495X7 471 aa19.96■□□□□ 0.79
PHGDH-213ENST00000641272 FSD1Q9BTV5 496 aa19.96■□□□□ 0.79
PHGDH-213ENST00000641272 ADAMTS5Q9UNA0 930 aa19.96■□□□□ 0.79
PHGDH-213ENST00000641272 ZFYP08048 801 aaPredicted RBP19.95■□□□□ 0.78
PHGDH-213ENST00000641272 TAL1P17542 331 aaPredicted RBP19.95■□□□□ 0.78
PHGDH-213ENST00000641272 LRRC41Q15345 812 aa19.95■□□□□ 0.78
PHGDH-213ENST00000641272 LRIT3Q3SXY7 679 aa19.95■□□□□ 0.78
PHGDH-213ENST00000641272 SNRNP48Q6IEG0 339 aaKnown RBP19.95■□□□□ 0.78
PHGDH-213ENST00000641272 GIMAP6Q6P9H5 292 aa19.95■□□□□ 0.78
PHGDH-213ENST00000641272 DEFB123Q8N688 67 aa19.95■□□□□ 0.78
PHGDH-213ENST00000641272 ARRDC4Q8NCT1 418 aa19.95■□□□□ 0.78
PHGDH-213ENST00000641272 PI4K2BQ8TCG2 481 aa19.95■□□□□ 0.78
PHGDH-213ENST00000641272 CHMP4CQ96CF2 233 aa19.95■□□□□ 0.78
PHGDH-213ENST00000641272 LBHD1Q9BQE6 289 aaPredicted RBP19.95■□□□□ 0.78
PHGDH-213ENST00000641272 NYAP2Q9P242 653 aa19.95■□□□□ 0.78
PHGDH-213ENST00000641272 CLIP2Q9UDT6 1046 aa19.95■□□□□ 0.78
PHGDH-213ENST00000641272 ISY1Q9ULR0 285 aaKnown RBP19.95■□□□□ 0.78
PHGDH-213ENST00000641272 MCM3APO60318 1980 aa19.95■□□□□ 0.78
PHGDH-213ENST00000641272 F5H6K3 240 aa19.94■□□□□ 0.78
PHGDH-213ENST00000641272 ADCYAP1R1P41586 468 aa19.94■□□□□ 0.78
PHGDH-213ENST00000641272 KLRC3Q07444 240 aa19.94■□□□□ 0.78
PHGDH-213ENST00000641272 CPXCR1Q8N123 301 aa19.94■□□□□ 0.78
PHGDH-213ENST00000641272 KIFC2Q96AC6 838 aa19.94■□□□□ 0.78
PHGDH-213ENST00000641272 CEP95Q96GE4 821 aa19.94■□□□□ 0.78
PHGDH-213ENST00000641272 XPNPEP3Q9NQH7 507 aa19.94■□□□□ 0.78
PHGDH-213ENST00000641272 PRKAG2Q9UGJ0 569 aa19.94■□□□□ 0.78
PHGDH-213ENST00000641272 IGKV6D-41A0A0C4DH26 115 aa19.93■□□□□ 0.78
PHGDH-213ENST00000641272 PGK1P00558 417 aa19.93■□□□□ 0.78
PHGDH-213ENST00000641272 GNAT2P19087 354 aa19.93■□□□□ 0.78
PHGDH-213ENST00000641272 ZNF792Q3KQV3 632 aa19.93■□□□□ 0.78
PHGDH-213ENST00000641272 SLC39A5Q6ZMH5 540 aa19.93■□□□□ 0.78
PHGDH-213ENST00000641272 IFNL3Q8IZI9 196 aa19.93■□□□□ 0.78
PHGDH-213ENST00000641272 TINF2Q9BSI4 451 aa19.93■□□□□ 0.78
PHGDH-213ENST00000641272 TEX13BQ9BXU2 312 aa19.93■□□□□ 0.78
PHGDH-213ENST00000641272 TTC41PQ6P2S7 1318 aa19.93■□□□□ 0.78
PHGDH-213ENST00000641272 RARBP10826 455 aa19.92■□□□□ 0.78
PHGDH-213ENST00000641272 CCDC129Q6ZRS4 1044 aa19.92■□□□□ 0.78
PHGDH-213ENST00000641272 NAPBQ9H115 298 aa19.92■□□□□ 0.78
PHGDH-213ENST00000641272 RAVER2Q9HCJ3 691 aaKnown RBP19.92■□□□□ 0.78
PHGDH-213ENST00000641272 RIPK3Q9Y572 518 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms