RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 DBNDD2Q9BQY9 259 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 PPP1R12CQ9BZL4 782 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 MROH8Q9H579 483 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 SERPINB13Q9UIV8 391 aa11.88□□□□□ -0.51
PHGDH-212ENST00000641247 NOB1Q9ULX3 412 aaKnown RBP11.88□□□□□ -0.51
PHGDH-212ENST00000641247 UMODL1Q5DID0 1318 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 SYNRGQ9UMZ2 1314 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 FAM86C2PA6NEL3 165 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 TLL1O43897 1013 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 SNAI1O95863 264 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-212ENST00000641247 UQCRFS1P1P0C7P4 283 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 CYP7A1P22680 504 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 GABPAQ06546 454 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 PPIGQ13427 754 aaKnown RBP eCLIP11.87□□□□□ -0.516e-8■□□□□ 10.1
PHGDH-212ENST00000641247 MTX1Q13505 466 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 KRT40Q6A162 431 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 CLEC10AQ8IUN9 316 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 IL27Q8NEV9 243 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 HERVK_113Q902F9 699 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 TSEN34Q9BSV6 310 aaKnown RBP11.87□□□□□ -0.51
PHGDH-212ENST00000641247 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 EHD4Q9H223 541 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 CD320Q9NPF0 282 aa11.87□□□□□ -0.51
PHGDH-212ENST00000641247 PNMA6EA0A0J9YXQ4 647 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 FCER1AP12319 257 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 AKR1A1P14550 325 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 CYP2C18P33260 490 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 TMEM31Q5JXX7 168 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 SLC28A3Q9HAS3 691 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 CABP5Q9NP86 173 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 SLC5A4Q9NY91 659 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 NRBP1Q9UHY1 535 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 MSRAQ9UJ68 235 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 HCN4Q9Y3Q4 1203 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 SUPT16HQ9Y5B9 1047 aaKnown RBP11.86□□□□□ -0.51
PHGDH-212ENST00000641247 XIRP2A4UGR9 3374 aa11.86□□□□□ -0.51
PHGDH-212ENST00000641247 BDP1A6H8Y1 2624 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 EPOPA6NHQ4 379 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 SMIM22K7EJ46 135 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 ERC2O15083 957 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 CTAGE5O15320 804 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 GPR37L1O60883 481 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 USP5P45974 858 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 RAB30Q15771 203 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 ALDH1L2Q3SY69 923 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-212ENST00000641247 ATF7IPQ6VMQ6 1270 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 OTOP2Q7RTS6 562 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 FAM126BQ8IXS8 530 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 SPICE1Q8N0Z3 855 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 MMP19Q99542 508 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 ADAMTS5Q9UNA0 930 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 ZNF236Q9UL36 1845 aa11.85□□□□□ -0.51
PHGDH-212ENST00000641247 TCF20Q9UGU0 1960 aaKnown RBP11.85□□□□□ -0.51
PHGDH-212ENST00000641247 ROBO3Q96MS0 1386 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 CHD9Q3L8U1 2897 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 ARVCFO00192 962 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 FLOT1O75955 427 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 ASGR1P07306 291 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 TTC39AQ5SRH9 613 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 PSRC1Q6PGN9 363 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-212ENST00000641247 TMEM199Q8N511 208 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 ANTXR1Q9H6X2 564 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 CERS4Q9HA82 394 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 IL23AQ9NPF7 189 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 SMC4Q9NTJ3 1288 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 FBXO28Q9NVF7 368 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 DIS3Q9Y2L1 958 aaKnown RBP11.84□□□□□ -0.51
PHGDH-212ENST00000641247 MTCH2Q9Y6C9 303 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 PLXNA1Q9UIW2 1896 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 ELP1O95163 1332 aa11.84□□□□□ -0.51
PHGDH-212ENST00000641247 MOXD2PA6NHM9 499 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 ARHGEF15O94989 841 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 CD4P01730 458 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 FGBP02675 491 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 CYP2D6P10635 497 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 PTGS1P23219 599 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 SLFN5Q08AF3 891 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 SKIV2LQ15477 1246 aaKnown RBP11.83□□□□□ -0.52
PHGDH-212ENST00000641247 TNNI3KQ59H18 835 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 TTC6Q86TZ1 520 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 RIOX2Q8IUF8 465 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 MAGEB6Q8N7X4 407 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 MB21D1Q8N884 522 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 REPS2Q8NFH8 660 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 RIOK1Q9BRS2 568 aaKnown RBP11.83□□□□□ -0.52
PHGDH-212ENST00000641247 TLR7Q9NYK1 1049 aaKnown RBP11.83□□□□□ -0.52
PHGDH-212ENST00000641247 TNNQ9UQP3 1299 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 FPGT-TNNI3KV9GXZ4 949 aa11.83□□□□□ -0.52
PHGDH-212ENST00000641247 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 RBAK-RBAKDNI3L0D1 243 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 APBB1O00213 710 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 MPHOSPH10O00566 681 aaKnown RBP11.82□□□□□ -0.52
PHGDH-212ENST00000641247 POU3F3P20264 500 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-212ENST00000641247 CCL23P55773 120 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 G3BP1Q13283 466 aaKnown RBP eCLIP11.82□□□□□ -0.528e-8■■■■□ 22.6
PHGDH-212ENST00000641247 PPP2R2DQ66LE6 453 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 SPRED2Q7Z698 418 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms