RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 CCNHP51946 323 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 DAB2P98082 770 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 IRGCQ6NXR0 463 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 TRIML2Q8N7C3 387 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 PARD3BQ8TEW8 1205 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 GLMNQ92990 594 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 SH3KBP1Q96B97 665 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 SPDL1Q96EA4 605 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 NR1H4Q96RI1 486 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 SELENOSQ9BQE4 189 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 ANO2Q9NQ90 1003 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 ATPIF1Q9UII2 106 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 STXBP3O00186 592 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ZSCAN9O15535 394 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ST18O60284 1047 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 MGEA5O60502 916 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ERLIN2O94905 339 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ALOX15P16050 662 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 HALP42357 657 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 CUL3Q13618 768 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 GNL2Q13823 731 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ACAP1Q15027 740 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 CCNG2Q16589 344 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 LETM2Q2VYF4 491 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 CFAP70Q5T0N1 1121 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 BBOF1Q8ND07 529 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 GPT2Q8TD30 523 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 PANK1Q8TE04 598 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ZNF483Q8TF39 744 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 RIC8AQ9NPQ8 531 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 LMCD1Q9NZU5 365 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 POLKQ9UBT6 870 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 EYSQ5T1H1 3165 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 SPTBN5Q9NRC6 3674 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 UHRF1BP1Q6BDS2 1440 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 DENND4BO75064 1496 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 IQCA1LA6NCM1 817 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 NDUFB5O43674 189 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 USO1O60763 962 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 CYP2E1P05181 493 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 PARP1P09874 1014 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 SUZ12Q15022 739 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 SLC5A9Q2M3M2 681 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 TBC1D25Q3MII6 688 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ZC3H12BQ5HYM0 836 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 RUFY3Q7L099 469 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ACMSDQ8TDX5 336 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 GTF3C6Q969F1 213 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 JPH4Q96JJ6 628 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 SRRTQ9BXP5 876 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 SENP2Q9HC62 589 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 PTPRHQ9HD43 1115 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 CLIC5Q9NZA1 410 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 MTRF1LQ9UGC7 380 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 MBD5Q9P267 1494 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 FAM170AA1A519 330 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 TARSL2A2RTX5 802 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ORC4O43929 436 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 KRT14P02533 472 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 EIF4BP23588 611 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 GRK2P25098 689 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ATP5DP30049 168 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 TAF7Q15545 349 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 PLPP6Q8IY26 295 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 STAG1Q8WVM7 1258 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 RBM17Q96I25 401 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 OSBPL9Q96SU4 736 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 SIL1Q9H173 461 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 CSRNP2Q9H175 543 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 SOS1Q07889 1333 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 KNDC1Q76NI1 1749 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ATAD2Q6PL18 1390 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ST20-MTHFSA0A0A6YYL1 179 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 TBKBP1A7MCY6 615 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 F8W031 263 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 SNPHO15079 494 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 AGR2O95994 175 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 PAPOLAP51003 745 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 PDE4BQ07343 736 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 FAM133BQ5BKY9 247 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 BMP2KLQ5H9B9 411 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 NOC3LQ8WTT2 800 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 CHMP7Q8WUX9 453 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 ASIC4Q96FT7 647 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 CFAP36Q96G28 342 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 C16orf45Q96MC5 204 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 CCT7Q99832 543 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 BEGAINQ9BUH8 593 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 PCDHB15Q9Y5E8 787 aa4.32□□□□□ -1.72
R3HDM1-220ENST00000628915 CAMSAP1Q5T5Y3 1602 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 E9PCH4 1651 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 COBLO75128 1261 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 TAF1CQ15572 869 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 RBM20Q5T481 1227 aaKnown RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 CATSPER4Q7RTX7 472 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 CCDC84Q86UT8 332 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 CCDC63Q8NA47 563 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 SMC1BQ8NDV3 1235 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms