RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 SERPINB13Q9UIV8 391 aa22.54■■□□□ 1.2
TREX1-205ENST00000625293 AKR1B1P15121 316 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 SHMT1P34896 483 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 ERCC4Q92889 916 aaPredicted RBP22.53■■□□□ 1.2
TREX1-205ENST00000625293 EHD4Q9H223 541 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 MTMR4Q9NYA4 1195 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 NOL7Q9UMY1 257 aaKnown RBP22.53■■□□□ 1.2
TREX1-205ENST00000625293 WNT7AO00755 349 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 ADAMTS3O15072 1205 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 CALML3P27482 149 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 SMARCA1P28370 1054 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 TYW1BQ6NUM6 668 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 RASGRP2Q7LDG7 609 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 ELOA2Q8IYF1 753 aaPredicted RBP22.53■■□□□ 1.2
TREX1-205ENST00000625293 FAM177A1Q8N128 213 aaPredicted RBP22.53■■□□□ 1.2
TREX1-205ENST00000625293 PIBF1Q8WXW3 757 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 IDI2Q9BXS1 227 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 SERPINA10Q9UK55 444 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 KCNH3Q9ULD8 1083 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 PCDHAC2Q9Y5I4 1007 aa22.53■■□□□ 1.2
TREX1-205ENST00000625293 BMP15O95972 392 aa22.52■■□□□ 1.2
TREX1-205ENST00000625293 CLCN1P35523 988 aa22.52■■□□□ 1.2
TREX1-205ENST00000625293 GRIPAP1Q4V328 841 aa22.52■■□□□ 1.2
TREX1-205ENST00000625293 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.52■■□□□ 1.2
TREX1-205ENST00000625293 A0A087WWV3 80 aa22.51■■□□□ 1.19
TREX1-205ENST00000625293 KLRF2D3W0D1 207 aa22.51■■□□□ 1.19
TREX1-205ENST00000625293 M0R2N6 131 aa22.51■■□□□ 1.19
TREX1-205ENST00000625293 NPM3O75607 178 aaKnown RBP22.51■■□□□ 1.19
TREX1-205ENST00000625293 PARP1P09874 1014 aaKnown RBP22.51■■□□□ 1.19
TREX1-205ENST00000625293 TRAPPC10P48553 1259 aa22.51■■□□□ 1.19
TREX1-205ENST00000625293 WWC2Q6AWC2 1192 aa22.51■■□□□ 1.19
TREX1-205ENST00000625293 ZFPM1Q8IX07 1006 aa22.51■■□□□ 1.19
TREX1-205ENST00000625293 DAGLBQ8NCG7 672 aa22.51■■□□□ 1.19
TREX1-205ENST00000625293 GPKOWQ92917 476 aaPredicted RBP eCLIP22.51■■□□□ 1.19
TREX1-205ENST00000625293 TUBE1Q9UJT0 475 aa22.51■■□□□ 1.19
TREX1-205ENST00000625293 YDJCA8MPS7 323 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 HLA-DOAP06340 250 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 GOLGA8HP0CJ92 632 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 ATP2B1P20020 1258 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 LARGE2Q8N3Y3 721 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 NMRK2Q9NPI5 230 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 BARHL2Q9NY43 387 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 PCDHA4Q9UN74 947 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 GREB1LQ9C091 1923 aaPredicted RBP22.5■■□□□ 1.19
TREX1-205ENST00000625293 STXBP3O00186 592 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 PPIP5K2O43314 1243 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 SNHG28P0DPA3 235 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 TTC38Q5R3I4 469 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 KRBA2Q6ZNG9 492 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 BLIDQ8IZY5 108 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 GPBP1L1Q9HC44 474 aaPredicted RBP22.5■■□□□ 1.19
TREX1-205ENST00000625293 FAM198AQ9UFP1 575 aa22.5■■□□□ 1.19
TREX1-205ENST00000625293 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.49■■□□□ 1.19
TREX1-205ENST00000625293 DDNO94850 711 aaPredicted RBP22.49■■□□□ 1.19
TREX1-205ENST00000625293 LONRF3Q496Y0 759 aa22.49■■□□□ 1.19
TREX1-205ENST00000625293 GALNT17Q6IS24 598 aa22.49■■□□□ 1.19
TREX1-205ENST00000625293 USP17L2Q6R6M4 530 aa22.49■■□□□ 1.19
TREX1-205ENST00000625293 DNAJC18Q9H819 358 aa22.49■■□□□ 1.19
TREX1-205ENST00000625293 FAM13BQ9NYF5 915 aa22.49■■□□□ 1.19
TREX1-205ENST00000625293 MTMR7Q9Y216 660 aa22.49■■□□□ 1.19
TREX1-205ENST00000625293 BAZ2BQ9UIF8 2168 aaKnown RBP22.49■■□□□ 1.19
TREX1-205ENST00000625293 SIPA1L1O43166 1804 aa22.49■■□□□ 1.19
TREX1-205ENST00000625293 DICER1Q9UPY3 1922 aaKnown RBP22.48■■□□□ 1.19
TREX1-205ENST00000625293 PDHBP11177 359 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 SPECC1Q5M775 1068 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 PIK3AP1Q6ZUJ8 805 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 DHX40Q8IX18 779 aaKnown RBP22.48■■□□□ 1.19
TREX1-205ENST00000625293 CEP57L1Q8IYX8 460 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 CCDC148Q8NFR7 591 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 CSRNP2Q9H175 543 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 DHX36Q9H2U1 1008 aaKnown RBP22.48■■□□□ 1.19
TREX1-205ENST00000625293 ZKSCAN5Q9Y2L8 839 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 ZNF541Q9H0D2 1346 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 USP17L5A8MUK1 530 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 NLRP12P59046 1061 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 ATP2C1P98194 919 aaPredicted RBP22.48■■□□□ 1.19
TREX1-205ENST00000625293 SH3BP5LQ7L8J4 393 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 METTL16Q86W50 562 aaKnown RBP22.48■■□□□ 1.19
TREX1-205ENST00000625293 FERMT2Q96AC1 680 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 BPIFA3Q9BQP9 254 aa22.48■■□□□ 1.19
TREX1-205ENST00000625293 GLTPD2A6NH11 291 aa22.47■■□□□ 1.19
TREX1-205ENST00000625293 DPCR1Q3MIW9 517 aa22.47■■□□□ 1.19
TREX1-205ENST00000625293 CPVLQ9H3G5 476 aa22.47■■□□□ 1.19
TREX1-205ENST00000625293 RIOX1Q9H6W3 641 aa22.47■■□□□ 1.19
TREX1-205ENST00000625293 RRAGCQ9HB90 399 aa22.47■■□□□ 1.19
TREX1-205ENST00000625293 TTLL1O95922 423 aa22.46■■□□□ 1.19
TREX1-205ENST00000625293 CACNB3P54284 484 aa22.46■■□□□ 1.19
TREX1-205ENST00000625293 PLCB2Q00722 1185 aa22.46■■□□□ 1.19
TREX1-205ENST00000625293 MDM2Q00987 491 aaPredicted RBP22.46■■□□□ 1.19
TREX1-205ENST00000625293 ZNF174Q15697 407 aa22.46■■□□□ 1.19
TREX1-205ENST00000625293 PLA2G4DQ86XP0 818 aa22.46■■□□□ 1.19
TREX1-205ENST00000625293 PSME4Q14997 1843 aa22.46■■□□□ 1.19
TREX1-205ENST00000625293 DDTLA6NHG4 134 aaPredicted RBP22.45■■□□□ 1.19
TREX1-205ENST00000625293 FZD9O00144 591 aa22.45■■□□□ 1.19
TREX1-205ENST00000625293 ASPRV1Q53RT3 343 aa22.45■■□□□ 1.19
TREX1-205ENST00000625293 SARM1Q6SZW1 724 aa22.45■■□□□ 1.19
TREX1-205ENST00000625293 HEATR3Q7Z4Q2 680 aa22.45■■□□□ 1.19
TREX1-205ENST00000625293 LRRC47Q8N1G4 583 aaKnown RBP22.45■■□□□ 1.19
TREX1-205ENST00000625293 CNNM3Q8NE01 707 aa22.45■■□□□ 1.19
TREX1-205ENST00000625293 JDP2Q8WYK2 163 aa22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms