RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 RBM26Q5T8P6 1007 aaKnown RBP24.67■■□□□ 1.54
SPAST-204ENST00000621856 CCDC73Q6ZRK6 1079 aa24.67■■□□□ 1.54
SPAST-204ENST00000621856 RRP36Q96EU6 259 aaKnown RBP24.67■■□□□ 1.54
SPAST-204ENST00000621856 NUP62CLQ9H1M0 184 aa24.67■■□□□ 1.54
SPAST-204ENST00000621856 CABP5Q9NP86 173 aa24.67■■□□□ 1.54
SPAST-204ENST00000621856 FZD9O00144 591 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 GMPSP49915 693 aaPredicted RBP24.66■■□□□ 1.54
SPAST-204ENST00000621856 SEPT2Q15019 361 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 ADALQ6DHV7 355 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 HEATR3Q7Z4Q2 680 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 FAM83AQ86UY5 434 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 JMYQ8N9B5 988 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 FSIP1Q8NA03 581 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 NYAP2Q9P242 653 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 NR1I2O75469 434 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 SNHG28P0DPA3 235 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 EEF2P13639 858 aaKnown RBP24.66■■□□□ 1.54
SPAST-204ENST00000621856 UBA5Q9GZZ9 404 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 VAT1LQ9HCJ6 419 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 GPCPD1Q9NPB8 672 aa24.66■■□□□ 1.54
SPAST-204ENST00000621856 SEC63Q9UGP8 760 aaKnown RBP24.66■■□□□ 1.54
SPAST-204ENST00000621856 TOB1P50616 345 aaPredicted RBP24.65■■□□□ 1.54
SPAST-204ENST00000621856 ICA1Q05084 483 aa24.65■■□□□ 1.54
SPAST-204ENST00000621856 PTPAQ15257 358 aa24.65■■□□□ 1.54
SPAST-204ENST00000621856 CCDC96Q2M329 555 aa24.65■■□□□ 1.54
SPAST-204ENST00000621856 WWC2Q6AWC2 1192 aa24.65■■□□□ 1.54
SPAST-204ENST00000621856 ARHGAP27Q6ZUM4 889 aa24.65■■□□□ 1.54
SPAST-204ENST00000621856 HOMER1Q86YM7 354 aa24.65■■□□□ 1.54
SPAST-204ENST00000621856 CCDC148Q8NFR7 591 aa24.65■■□□□ 1.54
SPAST-204ENST00000621856 MRPS27Q92552 414 aaKnown RBP24.65■■□□□ 1.54
SPAST-204ENST00000621856 TSPY26PQ9H489 355 aa24.65■■□□□ 1.54
SPAST-204ENST00000621856 A0A1W2PQ27 194 aa24.64■■□□□ 1.54
SPAST-204ENST00000621856 A0A1W2PQ64 194 aa24.64■■□□□ 1.54
SPAST-204ENST00000621856 A0A1W2PQD8 194 aa24.64■■□□□ 1.54
SPAST-204ENST00000621856 PPP6R2O75170 966 aa24.64■■□□□ 1.54
SPAST-204ENST00000621856 MARCKSP29966 332 aaPredicted RBP24.64■■□□□ 1.54
SPAST-204ENST00000621856 TNNI2P48788 182 aa24.64■■□□□ 1.54
SPAST-204ENST00000621856 ZNF543Q08ER8 600 aa24.64■■□□□ 1.54
SPAST-204ENST00000621856 NPY5RQ15761 445 aa24.64■■□□□ 1.54
SPAST-204ENST00000621856 MICALL2Q8IY33 904 aa24.64■■□□□ 1.54
SPAST-204ENST00000621856 FHDC1Q9C0D6 1143 aaPredicted RBP24.64■■□□□ 1.54
SPAST-204ENST00000621856 TMEM39BQ9GZU3 492 aa24.64■■□□□ 1.54
SPAST-204ENST00000621856 GOLPH3LQ9H4A5 285 aa24.64■■□□□ 1.54
SPAST-204ENST00000621856 NOL7Q9UMY1 257 aaKnown RBP24.64■■□□□ 1.54
SPAST-204ENST00000621856 RAD21O60216 631 aa24.64■■□□□ 1.53
SPAST-204ENST00000621856 GH2P01242 217 aa24.64■■□□□ 1.53
SPAST-204ENST00000621856 ATP2B1P20020 1258 aa24.64■■□□□ 1.53
SPAST-204ENST00000621856 DPF2Q92785 391 aa24.64■■□□□ 1.53
SPAST-204ENST00000621856 MKL1Q969V6 931 aa24.64■■□□□ 1.53
SPAST-204ENST00000621856 TNMDQ9H2S6 317 aa24.64■■□□□ 1.53
SPAST-204ENST00000621856 CLSTN2Q9H4D0 955 aa24.64■■□□□ 1.53
SPAST-204ENST00000621856 BARHL2Q9NY43 387 aa24.64■■□□□ 1.53
SPAST-204ENST00000621856 STXBP3O00186 592 aa24.63■■□□□ 1.53
SPAST-204ENST00000621856 RIOX1Q9H6W3 641 aa24.63■■□□□ 1.53
SPAST-204ENST00000621856 CEP131Q9UPN4 1083 aa24.63■■□□□ 1.53
SPAST-204ENST00000621856 ZNF541Q9H0D2 1346 aa24.62■■□□□ 1.53
SPAST-204ENST00000621856 FAM205CA6NFA0 338 aa24.62■■□□□ 1.53
SPAST-204ENST00000621856 XRCC6P12956 609 aaKnown RBP eCLIP24.62■■□□□ 1.53
SPAST-204ENST00000621856 CAMK4Q16566 473 aa24.62■■□□□ 1.53
SPAST-204ENST00000621856 GPATCH4Q5T3I0 446 aaKnown RBP24.62■■□□□ 1.53
SPAST-204ENST00000621856 BLIDQ8IZY5 108 aa24.62■■□□□ 1.53
SPAST-204ENST00000621856 TNFRSF25Q93038 417 aa24.62■■□□□ 1.53
SPAST-204ENST00000621856 PIGSQ96S52 555 aa24.62■■□□□ 1.53
SPAST-204ENST00000621856 CNOT7Q9UIV1 285 aaKnown RBP24.62■■□□□ 1.53
SPAST-204ENST00000621856 PCDHA4Q9UN74 947 aa24.62■■□□□ 1.53
SPAST-204ENST00000621856 FAM160A1Q05DH4 1040 aa24.61■■□□□ 1.53
SPAST-204ENST00000621856 RRP1BQ14684 758 aaKnown RBP24.61■■□□□ 1.53
SPAST-204ENST00000621856 MAP3K11Q16584 847 aa24.61■■□□□ 1.53
SPAST-204ENST00000621856 EARS2Q5JPH6 523 aaKnown RBP24.61■■□□□ 1.53
SPAST-204ENST00000621856 FAM177A1Q8N128 213 aaPredicted RBP24.61■■□□□ 1.53
SPAST-204ENST00000621856 CCDC12Q8WUD4 166 aaPredicted RBP24.61■■□□□ 1.53
SPAST-204ENST00000621856 PCDHB6Q9Y5E3 794 aa24.61■■□□□ 1.53
SPAST-204ENST00000621856 TRIM75PA6NK02 468 aa24.61■■□□□ 1.53
SPAST-204ENST00000621856 NAPAP54920 295 aa24.61■■□□□ 1.53
SPAST-204ENST00000621856 GALNT17Q6IS24 598 aa24.61■■□□□ 1.53
SPAST-204ENST00000621856 TYW1BQ6NUM6 668 aa24.61■■□□□ 1.53
SPAST-204ENST00000621856 DCAF4Q8WV16 495 aa24.61■■□□□ 1.53
SPAST-204ENST00000621856 RBSNQ9H1K0 784 aa24.61■■□□□ 1.53
SPAST-204ENST00000621856 EGFRP00533 1210 aa24.6■■□□□ 1.53
SPAST-204ENST00000621856 JAG1P78504 1218 aa24.6■■□□□ 1.53
SPAST-204ENST00000621856 TBC1D10BQ4KMP7 808 aaPredicted RBP24.6■■□□□ 1.53
SPAST-204ENST00000621856 AXDND1Q5T1B0 1012 aaPredicted RBP24.6■■□□□ 1.53
SPAST-204ENST00000621856 SLFN13Q68D06 897 aa24.6■■□□□ 1.53
SPAST-204ENST00000621856 KCTD1Q719H9 257 aa24.6■■□□□ 1.53
SPAST-204ENST00000621856 SAMD7Q7Z3H4 446 aa24.6■■□□□ 1.53
SPAST-204ENST00000621856 CDAN1Q8IWY9 1227 aa24.6■■□□□ 1.53
SPAST-204ENST00000621856 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.6■■□□□ 1.53
SPAST-204ENST00000621856 DICER1Q9UPY3 1922 aaKnown RBP24.6■■□□□ 1.53
SPAST-204ENST00000621856 A0A1B0GVL5 298 aa24.59■■□□□ 1.53
SPAST-204ENST00000621856 TBC1D12O60347 775 aa24.59■■□□□ 1.53
SPAST-204ENST00000621856 KINO60870 393 aaKnown RBP24.59■■□□□ 1.53
SPAST-204ENST00000621856 TNFAIP1Q13829 316 aa24.59■■□□□ 1.53
SPAST-204ENST00000621856 PIK3AP1Q6ZUJ8 805 aa24.59■■□□□ 1.53
SPAST-204ENST00000621856 SIAH1Q8IUQ4 282 aa24.59■■□□□ 1.53
SPAST-204ENST00000621856 CUTAO60888 179 aa24.58■■□□□ 1.53
SPAST-204ENST00000621856 LMNB1P20700 586 aa24.58■■□□□ 1.53
SPAST-204ENST00000621856 CMA1P23946 247 aa24.58■■□□□ 1.53
SPAST-204ENST00000621856 RASA3Q14644 834 aa24.58■■□□□ 1.53
SPAST-204ENST00000621856 NOM1Q5C9Z4 860 aaKnown RBP24.58■■□□□ 1.53
SPAST-204ENST00000621856 TTBK2Q6IQ55 1244 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms