RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 SULF1Q8IWU6 871 aa21.54■■□□□ 1.04
SEMA6C-210ENST00000621728 GBP4Q96PP9 640 aa21.54■■□□□ 1.04
SEMA6C-210ENST00000621728 ZNF341Q9BYN7 854 aa21.54■■□□□ 1.04
SEMA6C-210ENST00000621728 DOCK1Q14185 1865 aa21.54■■□□□ 1.04
SEMA6C-210ENST00000621728 DCAF15Q66K64 600 aa21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 ZKSCAN4Q969J2 545 aaPredicted RBP21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 VAT1LQ9HCJ6 419 aa21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 VPS54Q9P1Q0 977 aa21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 ISY1Q9ULR0 285 aaKnown RBP21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 F5H6K3 240 aa21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 NDUFB10O96000 172 aa21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 GNAQP50148 359 aa21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 KLRC3Q07444 240 aa21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 ZYXQ15942 572 aaKnown RBP21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 USP48Q86UV5 1035 aa21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 SPICE1Q8N0Z3 855 aa21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 WRNIP1Q96S55 665 aa21.53■■□□□ 1.04
SEMA6C-210ENST00000621728 MYH15Q9Y2K3 1946 aa21.52■■□□□ 1.04
SEMA6C-210ENST00000621728 KIF28PB7ZC32 967 aa21.52■■□□□ 1.04
SEMA6C-210ENST00000621728 ASNSP08243 561 aa21.52■■□□□ 1.04
SEMA6C-210ENST00000621728 SLC16A2P36021 539 aa21.52■■□□□ 1.04
SEMA6C-210ENST00000621728 DNM1Q05193 864 aaKnown RBP21.52■■□□□ 1.04
SEMA6C-210ENST00000621728 ASPRV1Q53RT3 343 aa21.52■■□□□ 1.04
SEMA6C-210ENST00000621728 WASF1Q92558 559 aa21.52■■□□□ 1.04
SEMA6C-210ENST00000621728 ARHGEF10LQ9HCE6 1279 aa21.52■■□□□ 1.04
SEMA6C-210ENST00000621728 IQCA1LA6NCM1 817 aa21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 GPKOWQ92917 476 aaPredicted RBP eCLIP21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 GDPD2Q9HCC8 539 aa21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 ZNF112Q9UJU3 913 aa21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 CTNND1O60716 968 aaKnown RBP21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 PDIA4P13667 645 aaKnown RBP21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 L1TD1Q5T7N2 865 aaKnown RBP21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 HOMER1Q86YM7 354 aa21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 GMCL1P1Q8NEA9 526 aa21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 SPZ1Q9BXG8 430 aa21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 CNPY2Q9Y2B0 182 aa21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 TMX2Q9Y320 296 aa21.51■■□□□ 1.03
SEMA6C-210ENST00000621728 SCG2P13521 617 aa21.5■■□□□ 1.03
SEMA6C-210ENST00000621728 SLC1A4P43007 532 aa21.5■■□□□ 1.03
SEMA6C-210ENST00000621728 TRIM29Q14134 588 aa21.5■■□□□ 1.03
SEMA6C-210ENST00000621728 PFKFB3Q16875 520 aaPredicted RBP21.5■■□□□ 1.03
SEMA6C-210ENST00000621728 SUPT20HL1Q3ZLR7 823 aa21.5■■□□□ 1.03
SEMA6C-210ENST00000621728 LZTS2Q9BRK4 669 aa21.5■■□□□ 1.03
SEMA6C-210ENST00000621728 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.5■■□□□ 1.03
SEMA6C-210ENST00000621728 KIF23Q02241 960 aaPredicted RBP21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 DGKZQ13574 1117 aa21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 DCAF4Q8WV16 495 aa21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 KLRG1Q96E93 195 aa21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 HOOK2Q96ED9 719 aa21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 PIGSQ96S52 555 aa21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 RRAGCQ9HB90 399 aa21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 USP2O75604 605 aaPredicted RBP21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 ZC3H15Q8WU90 426 aaKnown RBP21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 CDCA5Q96FF9 252 aa21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 OTOFQ9HC10 1997 aa21.49■■□□□ 1.03
SEMA6C-210ENST00000621728 ADAMTS3O15072 1205 aa21.48■■□□□ 1.03
SEMA6C-210ENST00000621728 NCLP19338 710 aaKnown RBP21.48■■□□□ 1.03
SEMA6C-210ENST00000621728 SKOR2Q2VWA4 1001 aaPredicted RBP21.48■■□□□ 1.03
SEMA6C-210ENST00000621728 TYW1BQ6NUM6 668 aa21.48■■□□□ 1.03
SEMA6C-210ENST00000621728 SCYL3Q8IZE3 742 aa21.48■■□□□ 1.03
SEMA6C-210ENST00000621728 ADGRF4Q8IZF3 695 aa21.48■■□□□ 1.03
SEMA6C-210ENST00000621728 RIOX1Q9H6W3 641 aa21.48■■□□□ 1.03
SEMA6C-210ENST00000621728 CLEC11AQ9Y240 323 aa21.48■■□□□ 1.03
SEMA6C-210ENST00000621728 MMP1P03956 469 aa21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 GPATCH4Q5T3I0 446 aaKnown RBP21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 WWC2Q6AWC2 1192 aa21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 OXER1Q8TDS5 423 aa21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 ZNF526Q8TF50 670 aaPredicted RBP21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 GMCL1Q96IK5 515 aa21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 TFIP11Q9UBB9 837 aaKnown RBP21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 PAPPA2Q9BXP8 1791 aa21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 USP17L10C9JJH3 530 aa21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 FMR1Q06787 632 aaKnown RBP eCLIP21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 MOB2Q70IA6 237 aa21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 FTOQ9C0B1 505 aaKnown RBP eCLIP21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 ZSCAN16Q9H4T2 348 aaPredicted RBP21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 JMJD4Q9H9V9 463 aa21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 ATP6V1DQ9Y5K8 247 aa21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 PHIPQ8WWQ0 1821 aa21.47■■□□□ 1.03
SEMA6C-210ENST00000621728 BTBD18B2RXH4 712 aa21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 BMP3P12645 472 aa21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 MAP1SQ66K74 1059 aaPredicted RBP21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 HEATR3Q7Z4Q2 680 aa21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 PNMA8AQ86V59 439 aaPredicted RBP21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 DIS3L2Q8IYB7 885 aaKnown RBP21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 RRP36Q96EU6 259 aaKnown RBP21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 FEZ1Q99689 392 aa21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 PHF20Q9BVI0 1012 aa21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 VCPKMTQ9H867 229 aa21.46■■□□□ 1.03
SEMA6C-210ENST00000621728 FIBPO43427 364 aa21.45■■□□□ 1.02
SEMA6C-210ENST00000621728 SNAP25P60880 206 aa21.45■■□□□ 1.02
SEMA6C-210ENST00000621728 NR5A1Q13285 461 aa21.45■■□□□ 1.02
SEMA6C-210ENST00000621728 NPY5RQ15761 445 aa21.45■■□□□ 1.02
SEMA6C-210ENST00000621728 FAM83BQ5T0W9 1011 aa21.45■■□□□ 1.02
SEMA6C-210ENST00000621728 GOPCQ9HD26 462 aa21.45■■□□□ 1.02
SEMA6C-210ENST00000621728 TMEM232C9JQI7 657 aa21.45■■□□□ 1.02
SEMA6C-210ENST00000621728 TRAK2O60296 914 aa21.45■■□□□ 1.02
SEMA6C-210ENST00000621728 PTPRAP18433 802 aa21.45■■□□□ 1.02
SEMA6C-210ENST00000621728 SMARCA1P28370 1054 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms