RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 MORN1Q5T089 497 aa26.26■■□□□ 1.79
CBWD3-212ENST00000616550 NKX2-3Q8TAU0 364 aa26.26■■□□□ 1.79
CBWD3-212ENST00000616550 SPATC1LQ9H0A9 340 aa26.26■■□□□ 1.79
CBWD3-212ENST00000616550 PARP14Q460N5 1801 aa26.25■■□□□ 1.79
CBWD3-212ENST00000616550 HMGCRP04035 888 aa26.25■■□□□ 1.79
CBWD3-212ENST00000616550 FGRP09769 529 aa26.25■■□□□ 1.79
CBWD3-212ENST00000616550 XRCC5P13010 732 aaKnown RBP26.25■■□□□ 1.79
CBWD3-212ENST00000616550 HAND2P61296 217 aa26.25■■□□□ 1.79
CBWD3-212ENST00000616550 LRRC47Q8N1G4 583 aaKnown RBP26.25■■□□□ 1.79
CBWD3-212ENST00000616550 MOV10L1Q9BXT6 1211 aaKnown RBP26.25■■□□□ 1.79
CBWD3-212ENST00000616550 UNC93B1Q9H1C4 597 aa26.25■■□□□ 1.79
CBWD3-212ENST00000616550 FBXO28Q9NVF7 368 aa26.25■■□□□ 1.79
CBWD3-212ENST00000616550 PPP1R9AQ9ULJ8 1098 aa26.25■■□□□ 1.79
CBWD3-212ENST00000616550 TACC3Q9Y6A5 838 aa26.25■■□□□ 1.79
CBWD3-212ENST00000616550 SLC15A5A6NIM6 579 aa26.24■■□□□ 1.79
CBWD3-212ENST00000616550 PTPREP23469 700 aa26.24■■□□□ 1.79
CBWD3-212ENST00000616550 RRP12Q5JTH9 1297 aaKnown RBP26.24■■□□□ 1.79
CBWD3-212ENST00000616550 TRMT44Q8IYL2 757 aaKnown RBP26.24■■□□□ 1.79
CBWD3-212ENST00000616550 USP6NLQ92738 828 aa26.24■■□□□ 1.79
CBWD3-212ENST00000616550 NUP88Q99567 741 aaPredicted RBP26.24■■□□□ 1.79
CBWD3-212ENST00000616550 ADAMTS5Q9UNA0 930 aa26.24■■□□□ 1.79
CBWD3-212ENST00000616550 GJB1P08034 283 aa26.23■■□□□ 1.79
CBWD3-212ENST00000616550 MAP2K5Q13163 448 aa26.23■■□□□ 1.79
CBWD3-212ENST00000616550 MFSD6Q6ZSS7 791 aa26.23■■□□□ 1.79
CBWD3-212ENST00000616550 GMCL1P1Q8NEA9 526 aa26.23■■□□□ 1.79
CBWD3-212ENST00000616550 SHCBP1Q8NEM2 672 aa26.23■■□□□ 1.79
CBWD3-212ENST00000616550 SLF1Q9BQI6 1058 aa26.23■■□□□ 1.79
CBWD3-212ENST00000616550 STX8Q9UNK0 236 aa26.23■■□□□ 1.79
CBWD3-212ENST00000616550 A0A0G2JMZ2 1700 aa26.22■■□□□ 1.79
CBWD3-212ENST00000616550 VWA5AO00534 786 aa26.22■■□□□ 1.79
CBWD3-212ENST00000616550 ZNF213O14771 459 aa26.22■■□□□ 1.79
CBWD3-212ENST00000616550 PCP11498 1178 aaKnown RBP26.22■■□□□ 1.79
CBWD3-212ENST00000616550 ERCC3P19447 782 aa26.22■■□□□ 1.79
CBWD3-212ENST00000616550 AKNAD1Q5T1N1 836 aa26.22■■□□□ 1.79
CBWD3-212ENST00000616550 TRIB2Q92519 343 aa26.22■■□□□ 1.79
CBWD3-212ENST00000616550 APBA2Q99767 749 aa26.22■■□□□ 1.79
CBWD3-212ENST00000616550 DSCC1Q9BVC3 393 aa26.22■■□□□ 1.79
CBWD3-212ENST00000616550 IL17RBQ9NRM6 502 aa26.22■■□□□ 1.79
CBWD3-212ENST00000616550 COL11A1P12107 1806 aaPredicted RBP26.21■■□□□ 1.79
CBWD3-212ENST00000616550 STRNO43815 780 aa26.21■■□□□ 1.79
CBWD3-212ENST00000616550 NMT2O60551 498 aa26.21■■□□□ 1.79
CBWD3-212ENST00000616550 ZKSCAN1P17029 563 aaPredicted RBP26.21■■□□□ 1.79
CBWD3-212ENST00000616550 GJA8P48165 433 aa26.21■■□□□ 1.79
CBWD3-212ENST00000616550 TMEM132BQ14DG7 1078 aa26.21■■□□□ 1.79
CBWD3-212ENST00000616550 SLFN13Q68D06 897 aa26.21■■□□□ 1.79
CBWD3-212ENST00000616550 NCAPG2Q86XI2 1143 aa26.21■■□□□ 1.79
CBWD3-212ENST00000616550 RUFY2Q8WXA3 655 aa26.21■■□□□ 1.79
CBWD3-212ENST00000616550 RNF41Q9H4P4 317 aaPredicted RBP26.21■■□□□ 1.79
CBWD3-212ENST00000616550 MROH8Q9H579 483 aa26.21■■□□□ 1.79
CBWD3-212ENST00000616550 SLC25A27O95847 323 aa26.2■■□□□ 1.78
CBWD3-212ENST00000616550 CENPQQ7L2Z9 268 aaPredicted RBP26.2■■□□□ 1.78
CBWD3-212ENST00000616550 PRPF38AQ8NAV1 312 aaKnown RBP26.2■■□□□ 1.78
CBWD3-212ENST00000616550 STAG1Q8WVM7 1258 aa26.2■■□□□ 1.78
CBWD3-212ENST00000616550 CTNNA3Q9UI47 895 aa26.2■■□□□ 1.78
CBWD3-212ENST00000616550 BMP3P12645 472 aa26.19■■□□□ 1.78
CBWD3-212ENST00000616550 GRB14Q14449 540 aa26.19■■□□□ 1.78
CBWD3-212ENST00000616550 HMX1Q9NP08 348 aaPredicted RBP26.19■■□□□ 1.78
CBWD3-212ENST00000616550 FEM1BQ9UK73 627 aa26.19■■□□□ 1.78
CBWD3-212ENST00000616550 ISY1Q9ULR0 285 aaKnown RBP26.19■■□□□ 1.78
CBWD3-212ENST00000616550 CTDP1Q9Y5B0 961 aaPredicted RBP26.19■■□□□ 1.78
CBWD3-212ENST00000616550 RPTORQ8N122 1335 aa26.18■■□□□ 1.78
CBWD3-212ENST00000616550 SGPL1O95470 568 aa26.18■■□□□ 1.78
CBWD3-212ENST00000616550 STAT3P40763 770 aa26.18■■□□□ 1.78
CBWD3-212ENST00000616550 TRIM32Q13049 653 aa26.18■■□□□ 1.78
CBWD3-212ENST00000616550 TBC1D10CQ8IV04 446 aa26.18■■□□□ 1.78
CBWD3-212ENST00000616550 U2AF1L4Q8WU68 220 aaKnown RBP26.18■■□□□ 1.78
CBWD3-212ENST00000616550 NBPF3Q9H094 633 aa26.18■■□□□ 1.78
CBWD3-212ENST00000616550 TCP11L1Q9NUJ3 509 aa26.18■■□□□ 1.78
CBWD3-212ENST00000616550 RAD50Q92878 1312 aa26.17■■□□□ 1.78
CBWD3-212ENST00000616550 CHMLP26374 656 aa26.17■■□□□ 1.78
CBWD3-212ENST00000616550 SLC1A4P43007 532 aa26.17■■□□□ 1.78
CBWD3-212ENST00000616550 CCL14Q16627 93 aa26.17■■□□□ 1.78
CBWD3-212ENST00000616550 IMMTQ16891 758 aaKnown RBP26.17■■□□□ 1.78
CBWD3-212ENST00000616550 DPP9Q86TI2 863 aa26.17■■□□□ 1.78
CBWD3-212ENST00000616550 RIOX2Q8IUF8 465 aa26.17■■□□□ 1.78
CBWD3-212ENST00000616550 KIFC2Q96AC6 838 aa26.17■■□□□ 1.78
CBWD3-212ENST00000616550 DEFB118Q96PH6 123 aa26.17■■□□□ 1.78
CBWD3-212ENST00000616550 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.17■■□□□ 1.78
CBWD3-212ENST00000616550 PAK6Q9NQU5 681 aaPredicted RBP26.17■■□□□ 1.78
CBWD3-212ENST00000616550 ZBED4O75132 1171 aa26.16■■□□□ 1.78
CBWD3-212ENST00000616550 TFRCP02786 760 aaKnown RBP26.16■■□□□ 1.78
CBWD3-212ENST00000616550 CAPN2P17655 700 aa26.16■■□□□ 1.78
CBWD3-212ENST00000616550 MCCP23508 829 aa26.16■■□□□ 1.78
CBWD3-212ENST00000616550 ADORA2AP29274 412 aa26.16■■□□□ 1.78
CBWD3-212ENST00000616550 COPB2P35606 906 aa26.16■■□□□ 1.78
CBWD3-212ENST00000616550 NOVP48745 357 aa26.16■■□□□ 1.78
CBWD3-212ENST00000616550 ESR2Q92731 530 aa26.16■■□□□ 1.78
CBWD3-212ENST00000616550 SHISA4Q96DD7 197 aa26.16■■□□□ 1.78
CBWD3-212ENST00000616550 GMCL1Q96IK5 515 aa26.16■■□□□ 1.78
CBWD3-212ENST00000616550 SLC5A4Q9NY91 659 aa26.16■■□□□ 1.78
CBWD3-212ENST00000616550 TMEM232C9JQI7 657 aa26.15■■□□□ 1.78
CBWD3-212ENST00000616550 HOXC6P09630 235 aa26.15■■□□□ 1.78
CBWD3-212ENST00000616550 FCER1AP12319 257 aa26.15■■□□□ 1.78
CBWD3-212ENST00000616550 PRKAR2AP13861 404 aaKnown RBP26.15■■□□□ 1.78
CBWD3-212ENST00000616550 ABRAQ8N0Z2 381 aa26.15■■□□□ 1.78
CBWD3-212ENST00000616550 REPS2Q8NFH8 660 aa26.15■■□□□ 1.78
CBWD3-212ENST00000616550 CHURC1Q8WUH1 139 aa26.15■■□□□ 1.78
CBWD3-212ENST00000616550 CHMP4CQ96CF2 233 aa26.15■■□□□ 1.78
CBWD3-212ENST00000616550 IL25Q9H293 177 aa26.15■■□□□ 1.78
CBWD3-212ENST00000616550 ZNF214Q9UL59 606 aaPredicted RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms