RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 TRAK1Q9UPV9 953 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 TPPPO94811 219 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 PARNO95453 639 aaKnown RBP6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 ATICP31939 592 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 ZNF157P51786 506 aaPredicted RBP6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 PRKCQQ04759 706 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 BMS1Q14692 1282 aaKnown RBP6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 SOGA3Q5TF21 947 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 LARP1BQ659C4 914 aaKnown RBP6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 ATG4DQ86TL0 474 aaPredicted RBP6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 TAX1BP1Q86VP1 789 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 TXNDC2Q86VQ3 553 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 HSCBQ8IWL3 235 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 TDRD7Q8NHU6 1098 aaKnown RBP6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 CCDC47Q96A33 483 aaKnown RBP6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 ALKBH8Q96BT7 664 aaKnown RBP6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 PAGR1Q9BTK6 254 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 ZC3H12CQ9C0D7 883 aaKnown RBP6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 RMI1Q9H9A7 625 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 PIDD1Q9HB75 910 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 VEZTQ9HBM0 779 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 ADAMTS6Q9UKP5 1117 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 VAV3Q9UKW4 847 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 FAN1Q9Y2M0 1017 aa6.88□□□□□ -1.31
LSM1P2-201ENST00000604911 RBM47A0AV96 593 aaKnown RBP6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 BIN1O00499 593 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 GADD45BO75293 160 aaPredicted RBP6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 RNASE1P07998 156 aaKnown RBP6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 CCDC159P0C7I6 412 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 MRE11P49959 708 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 TTLL4Q14679 1199 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 PDCD2Q16342 344 aaPredicted RBP6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 MFSD4BQ5TF39 518 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 EPS8L3Q8TE67 593 aaKnown RBP6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 CSRNP1Q96S65 589 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 DUSP23Q9BVJ7 150 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 SEZ6LQ9BYH1 1024 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 NIF3L1Q9GZT8 377 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 ETAA1Q9NY74 926 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 SCINQ9Y6U3 715 aa6.87□□□□□ -1.31
LSM1P2-201ENST00000604911 LEFTY1O75610 366 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 MAN1A1P33908 653 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 OXCT1P55809 520 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 SESN3P58005 492 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 IFI16Q16666 785 aaKnown RBP6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 CCDC92Q53HC0 331 aaPredicted RBP6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 HS1BP3Q53T59 392 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 UBE2Q1Q7Z7E8 422 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 LCA5Q86VQ0 697 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 LMNTD2Q8IXW0 634 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 DRC7Q8IY82 874 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 TTC30BQ8N4P2 665 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 MIGA1Q8NAN2 632 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 PLAGL2Q9UPG8 496 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 AKAP2Q9Y2D5 859 aa6.86□□□□□ -1.31
LSM1P2-201ENST00000604911 ERICH4A6NGS2 130 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 KINO60870 393 aaKnown RBP6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 IMPDH2P12268 514 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 VCAM1P19320 739 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 CD96P40200 585 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 RBM5P52756 815 aaKnown RBP eCLIP6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 IGBP1P78318 339 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 XPCQ01831 940 aaPredicted RBP6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 CHAF1AQ13111 956 aaPredicted RBP6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 MAP9Q49MG5 647 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 CCDC184Q52MB2 194 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 ZNF394Q53GI3 561 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 WWC2Q6AWC2 1192 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 CCDC174Q6PII3 467 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 CCDC191Q8NCU4 936 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 CDC5LQ99459 802 aaKnown RBP6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 SLX1AQ9BQ83 275 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 RBCK1Q9BYM8 510 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 RWDD1Q9H446 243 aaPredicted RBP6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 TMEM39AQ9NV64 488 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 PPP1R1BQ9UD71 204 aaPredicted RBP6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 PCOLCE2Q9UKZ9 415 aa6.85□□□□□ -1.31
LSM1P2-201ENST00000604911 SMARCA2P51531 1590 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 UQCRHLA0A096LP55 91 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 SHTN1A0MZ66 631 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 CEACAM5P06731 702 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 UQCRHP07919 91 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 HCLS1P14317 486 aaPredicted RBP6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 ADCY2Q08462 1091 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 ZNF648Q5T619 568 aaPredicted RBP6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 CCDC70Q6NSX1 233 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 SASS6Q6UVJ0 657 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 DTHD1Q6ZMT9 781 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 TRIM74Q86UV6 250 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 TRIM73Q86UV7 250 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 MORC1Q86VD1 984 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 ENOX1Q8TC92 643 aaKnown RBP6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 STK35Q8TDR2 534 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 ZBTB9Q96C00 473 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 DMRTB1Q96MA1 342 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 TNKS2Q9H2K2 1166 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 UPF2Q9HAU5 1272 aaKnown RBP6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 RC3H2Q9HBD1 1191 aaKnown RBP6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 TRPV5Q9NQA5 729 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms