RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 FILIP1LQ4L180 1135 aa22.91■■□□□ 1.26
SHKBP1-225ENST00000600733 TEX35Q5T0J7 233 aa22.91■■□□□ 1.26
SHKBP1-225ENST00000600733 KRT31Q15323 416 aa22.91■■□□□ 1.26
SHKBP1-225ENST00000600733 SMARCC1Q92922 1105 aaPredicted RBP22.91■■□□□ 1.26
SHKBP1-225ENST00000600733 ATP8A2Q9NTI2 1148 aa22.91■■□□□ 1.26
SHKBP1-225ENST00000600733 NRAPQ86VF7 1730 aa22.9■■□□□ 1.26
SHKBP1-225ENST00000600733 KDM4FA0A1W2PPD8 638 aa22.9■■□□□ 1.26
SHKBP1-225ENST00000600733 TRAPPC10P48553 1259 aa22.9■■□□□ 1.26
SHKBP1-225ENST00000600733 GPKOWQ92917 476 aaPredicted RBP eCLIP22.9■■□□□ 1.26
SHKBP1-225ENST00000600733 MYH8P13535 1937 aa22.9■■□□□ 1.26
SHKBP1-225ENST00000600733 KIAA1551Q9HCM1 1747 aa22.89■■□□□ 1.26
SHKBP1-225ENST00000600733 USP17L8P0C7I0 530 aa22.89■■□□□ 1.26
SHKBP1-225ENST00000600733 PLA2G4AP47712 749 aa22.89■■□□□ 1.26
SHKBP1-225ENST00000600733 TXNRD3Q86VQ6 643 aa22.89■■□□□ 1.26
SHKBP1-225ENST00000600733 NAA15Q9BXJ9 866 aaKnown RBP22.89■■□□□ 1.26
SHKBP1-225ENST00000600733 MCM9Q9NXL9 1143 aa22.89■■□□□ 1.26
SHKBP1-225ENST00000600733 ARPP21Q9UBL0 812 aaPredicted RBP22.89■■□□□ 1.26
SHKBP1-225ENST00000600733 FAM205AQ6ZU69 1335 aa22.89■■□□□ 1.26
SHKBP1-225ENST00000600733 TPM1P09493 284 aa22.89■■□□□ 1.25
SHKBP1-225ENST00000600733 RSRC2Q7L4I2 434 aaKnown RBP22.89■■□□□ 1.25
SHKBP1-225ENST00000600733 RASGRP4Q8TDF6 673 aa22.89■■□□□ 1.25
SHKBP1-225ENST00000600733 MAPK8IP1Q9UQF2 711 aa22.89■■□□□ 1.25
SHKBP1-225ENST00000600733 SLC10A5Q5PT55 438 aa22.88■■□□□ 1.25
SHKBP1-225ENST00000600733 CREBRFQ8IUR6 639 aa22.88■■□□□ 1.25
SHKBP1-225ENST00000600733 VPS16Q9H269 839 aa22.88■■□□□ 1.25
SHKBP1-225ENST00000600733 N4BP3O15049 544 aa22.88■■□□□ 1.25
SHKBP1-225ENST00000600733 GTPBP6O43824 516 aaPredicted RBP22.88■■□□□ 1.25
SHKBP1-225ENST00000600733 STAG2Q8N3U4 1231 aa22.88■■□□□ 1.25
SHKBP1-225ENST00000600733 SPATA31A5Q5VU36 1347 aa22.88■■□□□ 1.25
SHKBP1-225ENST00000600733 SPATA31A7Q8IWB4 1347 aa22.88■■□□□ 1.25
SHKBP1-225ENST00000600733 PAK1Q13153 545 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 SBK1Q52WX2 424 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 CNGA4Q8IV77 575 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 GPR161Q8N6U8 529 aaKnown RBP22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 C4orf32Q8N8J7 132 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 RWDD2AQ9UIY3 292 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 KIF5BP33176 963 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 RASGRP2Q7LDG7 609 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 BLIDQ8IZY5 108 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 NELFBQ8WX92 580 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 ZSWIM4Q9H7M6 989 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 KAT14Q9H8E8 782 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 IL17RBQ9NRM6 502 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 TAB2Q9NYJ8 693 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 LIMA1Q9UHB6 759 aaKnown RBP22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 SRP68Q9UHB9 627 aaKnown RBP22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 GDAQ9Y2T3 454 aa22.87■■□□□ 1.25
SHKBP1-225ENST00000600733 AHDC1Q5TGY3 1603 aaPredicted RBP22.86■■□□□ 1.25
SHKBP1-225ENST00000600733 PDS5AQ29RF7 1337 aaKnown RBP22.86■■□□□ 1.25
SHKBP1-225ENST00000600733 RNF225M0QZC1 329 aaPredicted RBP22.86■■□□□ 1.25
SHKBP1-225ENST00000600733 TFAP4Q01664 338 aa22.86■■□□□ 1.25
SHKBP1-225ENST00000600733 TYW1BQ6NUM6 668 aa22.86■■□□□ 1.25
SHKBP1-225ENST00000600733 NLRP3Q96P20 1036 aa22.86■■□□□ 1.25
SHKBP1-225ENST00000600733 ITIH6Q6UXX5 1313 aa22.86■■□□□ 1.25
SHKBP1-225ENST00000600733 RPN1P04843 607 aaKnown RBP22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 ZNF658Q5TYW1 1059 aaPredicted RBP22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 ACRBPQ8NEB7 543 aa22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 DYNLL2Q96FJ2 89 aa22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 CCDC88AQ3V6T2 1871 aa22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 NUTM2BA6NNL0 878 aaPredicted RBP22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 NUTM2EB1AL46 878 aaPredicted RBP22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 CALML3P27482 149 aa22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 COPB1P53618 953 aaKnown RBP22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 SLC51AQ86UW1 340 aa22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 DZIP1Q86YF9 867 aaKnown RBP22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 PNMA1Q8ND90 353 aa22.85■■□□□ 1.25
SHKBP1-225ENST00000600733 LRRC10BA6NIK2 292 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 KIF5CO60282 957 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 SASH3O75995 380 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 ABL1P00519 1130 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 STAT6P42226 847 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 PRCPP42785 496 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 ERVK-24P63145 666 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 TCP11X2Q5H9J9 407 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 ARL6IP4Q66PJ3 421 aaKnown RBP22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 CC2D1AQ6P1N0 951 aaPredicted RBP22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 NBPF5PQ86XG9 351 aaPredicted RBP22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 PYM1Q9BRP8 204 aaKnown RBP22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 PARD6BQ9BYG5 372 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 PP2D1A8MPX8 630 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 KCNJ18B7U540 433 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 LONP1P36776 959 aaKnown RBP22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 KCNJ12Q14500 433 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 ZNF569Q5MCW4 686 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 RABGGTAQ92696 567 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 GOLGA1Q92805 767 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 ANKRD2Q9GZV1 360 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 ABHD10Q9NUJ1 306 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 PCDHA4Q9UN74 947 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 MTMR7Q9Y216 660 aa22.84■■□□□ 1.25
SHKBP1-225ENST00000600733 TBC1D8O95759 1140 aa22.83■■□□□ 1.25
SHKBP1-225ENST00000600733 PTF1AQ7RTS3 328 aa22.83■■□□□ 1.25
SHKBP1-225ENST00000600733 SETDB2Q96T68 719 aa22.83■■□□□ 1.25
SHKBP1-225ENST00000600733 NUP88Q99567 741 aaPredicted RBP22.83■■□□□ 1.25
SHKBP1-225ENST00000600733 USP17L3A6NCW0 530 aa22.83■■□□□ 1.24
SHKBP1-225ENST00000600733 USP17L4A6NCW7 530 aa22.83■■□□□ 1.24
SHKBP1-225ENST00000600733 FECHP22830 423 aa22.83■■□□□ 1.24
SHKBP1-225ENST00000600733 USP17L1Q7RTZ2 530 aa22.83■■□□□ 1.24
SHKBP1-225ENST00000600733 CCDC51Q96ER9 411 aa22.83■■□□□ 1.24
SHKBP1-225ENST00000600733 MAST2Q6P0Q8 1798 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms